Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.62■□□□□ 0.73
UBA52P62987 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
UBA52P62987 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
UBA52P62987 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.62■□□□□ 0.73
UBA52P62987 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBA52P62987 THA1P-201ENST00000590384 1145 ntBASIC19.62■□□□□ 0.73
UBA52P62987 AL031848.2-201ENST00000607670 837 ntBASIC19.62■□□□□ 0.73
UBA52P62987 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC19.62■□□□□ 0.73
UBA52P62987 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBA52P62987 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.61■□□□□ 0.73
UBA52P62987 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.61■□□□□ 0.73
UBA52P62987 AC103724.3-201ENST00000564481 992 ntBASIC19.61■□□□□ 0.73
UBA52P62987 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
UBA52P62987 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.61■□□□□ 0.73
UBA52P62987 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
UBA52P62987 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
UBA52P62987 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.61■□□□□ 0.73
UBA52P62987 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.61■□□□□ 0.73
UBA52P62987 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBA52P62987 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
UBA52P62987 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBA52P62987 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
UBA52P62987 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBA52P62987 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBA52P62987 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.6■□□□□ 0.73
UBA52P62987 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBA52P62987 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.6■□□□□ 0.73
UBA52P62987 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBA52P62987 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
UBA52P62987 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
UBA52P62987 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBA52P62987 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
UBA52P62987 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.59■□□□□ 0.73
UBA52P62987 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBA52P62987 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.59■□□□□ 0.73
UBA52P62987 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.59■□□□□ 0.73
UBA52P62987 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
UBA52P62987 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
UBA52P62987 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBA52P62987 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBA52P62987 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBA52P62987 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBA52P62987 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBA52P62987 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.58■□□□□ 0.73
UBA52P62987 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBA52P62987 AC141586.4-201ENST00000624558 1573 ntBASIC19.58■□□□□ 0.73
UBA52P62987 AC019069.1-201ENST00000610008 1333 ntBASIC19.58■□□□□ 0.73
UBA52P62987 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBA52P62987 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
UBA52P62987 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBA52P62987 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBA52P62987 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBA52P62987 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.58■□□□□ 0.72
UBA52P62987 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.58■□□□□ 0.72
UBA52P62987 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBA52P62987 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
UBA52P62987 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBA52P62987 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.58■□□□□ 0.72
UBA52P62987 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.58■□□□□ 0.72
UBA52P62987 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBA52P62987 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.57■□□□□ 0.72
UBA52P62987 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBA52P62987 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBA52P62987 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBA52P62987 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBA52P62987 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
UBA52P62987 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBA52P62987 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBA52P62987 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA52P62987 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
UBA52P62987 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
UBA52P62987 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA52P62987 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.56■□□□□ 0.72
UBA52P62987 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA52P62987 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC19.56■□□□□ 0.72
UBA52P62987 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.56■□□□□ 0.72
UBA52P62987 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA52P62987 AL024507.2-201ENST00000606070 2574 ntBASIC19.56■□□□□ 0.72
UBA52P62987 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
UBA52P62987 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.56■□□□□ 0.72
UBA52P62987 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
UBA52P62987 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.55■□□□□ 0.72
UBA52P62987 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
UBA52P62987 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms