Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.84■□□□□ 0.61
PRRX1P54821 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRRX1P54821 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRRX1P54821 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PRRX1P54821 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PRRX1P54821 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.84■□□□□ 0.61
PRRX1P54821 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PRRX1P54821 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PRRX1P54821 BX664725.1-201ENST00000438252 379 ntBASIC18.83■□□□□ 0.6
PRRX1P54821 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PRRX1P54821 AC137630.3-201ENST00000607245 391 ntBASIC18.83■□□□□ 0.6
PRRX1P54821 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRRX1P54821 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.83■□□□□ 0.6
PRRX1P54821 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRRX1P54821 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRRX1P54821 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRRX1P54821 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
PRRX1P54821 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.82■□□□□ 0.6
PRRX1P54821 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRRX1P54821 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
PRRX1P54821 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.82■□□□□ 0.6
PRRX1P54821 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.82■□□□□ 0.6
PRRX1P54821 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRRX1P54821 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PRRX1P54821 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRRX1P54821 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRRX1P54821 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRRX1P54821 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.81■□□□□ 0.6
PRRX1P54821 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRRX1P54821 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.81■□□□□ 0.6
PRRX1P54821 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.81■□□□□ 0.6
PRRX1P54821 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRRX1P54821 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRRX1P54821 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.8■□□□□ 0.6
PRRX1P54821 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRRX1P54821 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
PRRX1P54821 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRRX1P54821 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRRX1P54821 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.8■□□□□ 0.6
PRRX1P54821 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRRX1P54821 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.8■□□□□ 0.6
PRRX1P54821 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 KRT125P-201ENST00000546827 989 ntBASIC18.79■□□□□ 0.6
PRRX1P54821 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 LSM7-203ENST00000585409 512 ntTSL 2 BASIC18.79■□□□□ 0.6
PRRX1P54821 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 AF131216.4-201ENST00000638924 1588 ntBASIC18.79■□□□□ 0.6
PRRX1P54821 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRRX1P54821 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRRX1P54821 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
PRRX1P54821 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRRX1P54821 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRRX1P54821 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRRX1P54821 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PRRX1P54821 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRRX1P54821 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.78■□□□□ 0.6
PRRX1P54821 Z92544.1-202ENST00000571933 1220 ntBASIC18.78■□□□□ 0.6
PRRX1P54821 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.78■□□□□ 0.6
PRRX1P54821 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.78■□□□□ 0.6
PRRX1P54821 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PRRX1P54821 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PRRX1P54821 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
PRRX1P54821 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 PREB-202ENST00000406567 1910 ntTSL 5 BASIC18.77■□□□□ 0.6
PRRX1P54821 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.77■□□□□ 0.6
PRRX1P54821 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.77■□□□□ 0.6
PRRX1P54821 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PRRX1P54821 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC18.77■□□□□ 0.6
PRRX1P54821 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PRRX1P54821 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PRRX1P54821 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRRX1P54821 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.76■□□□□ 0.59
PRRX1P54821 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PRRX1P54821 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.76■□□□□ 0.59
PRRX1P54821 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PRRX1P54821 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.76■□□□□ 0.59
PRRX1P54821 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRRX1P54821 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PRRX1P54821 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRRX1P54821 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PRRX1P54821 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms