Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC25A1P53007 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC25A1P53007 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SLC25A1P53007 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SLC25A1P53007 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC25A1P53007 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.45■□□□□ 0.86
SLC25A1P53007 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC25A1P53007 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC25A1P53007 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SLC25A1P53007 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 AC011551.1-201ENST00000614101 683 ntBASIC20.44■□□□□ 0.86
SLC25A1P53007 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC25A1P53007 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.43■□□□□ 0.86
SLC25A1P53007 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC25A1P53007 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 AL022069.1-201ENST00000568025 1636 ntBASIC20.43■□□□□ 0.86
SLC25A1P53007 HSD17B1P1-201ENST00000590052 955 ntBASIC20.43■□□□□ 0.86
SLC25A1P53007 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC25A1P53007 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC25A1P53007 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC25A1P53007 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.43■□□□□ 0.86
SLC25A1P53007 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SLC25A1P53007 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
SLC25A1P53007 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
SLC25A1P53007 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A1P53007 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A1P53007 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
SLC25A1P53007 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC25A1P53007 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SLC25A1P53007 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A1P53007 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A1P53007 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC25A1P53007 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.42■□□□□ 0.86
SLC25A1P53007 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.42■□□□□ 0.86
SLC25A1P53007 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC25A1P53007 ANOS2P-203ENST00000472227 1816 ntBASIC20.41■□□□□ 0.86
SLC25A1P53007 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC25A1P53007 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC25A1P53007 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC25A1P53007 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.41■□□□□ 0.86
SLC25A1P53007 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A1P53007 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.41■□□□□ 0.86
SLC25A1P53007 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A1P53007 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A1P53007 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC25A1P53007 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A1P53007 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC25A1P53007 KRT18P60-201ENST00000312876 1297 ntBASIC20.4■□□□□ 0.86
SLC25A1P53007 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A1P53007 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SLC25A1P53007 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC25A1P53007 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A1P53007 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.4■□□□□ 0.86
SLC25A1P53007 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC25A1P53007 AC019171.1-201ENST00000601251 1056 ntBASIC20.4■□□□□ 0.86
SLC25A1P53007 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC25A1P53007 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC25A1P53007 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
SLC25A1P53007 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC25A1P53007 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC25A1P53007 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A1P53007 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A1P53007 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC25A1P53007 AC092068.2-201ENST00000590491 1708 ntBASIC20.39■□□□□ 0.85
SLC25A1P53007 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SLC25A1P53007 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A1P53007 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A1P53007 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A1P53007 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC25A1P53007 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.38■□□□□ 0.85
SLC25A1P53007 AC022616.5-201ENST00000518796 181 ntBASIC20.38■□□□□ 0.85
SLC25A1P53007 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
SLC25A1P53007 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC25A1P53007 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC25A1P53007 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC25A1P53007 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SLC25A1P53007 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC25A1P53007 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A1P53007 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC25A1P53007 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms