Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.66■□□□□ 0.74
CBX5P45973 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
CBX5P45973 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CBX5P45973 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX5P45973 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX5P45973 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX5P45973 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CBX5P45973 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.74
CBX5P45973 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CBX5P45973 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CBX5P45973 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC19.64■□□□□ 0.73
CBX5P45973 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CBX5P45973 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX5P45973 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX5P45973 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.64■□□□□ 0.73
CBX5P45973 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CBX5P45973 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CBX5P45973 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 ZNRF2P2-203ENST00000454624 420 ntBASIC19.63■□□□□ 0.73
CBX5P45973 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.63■□□□□ 0.73
CBX5P45973 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CBX5P45973 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX5P45973 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CBX5P45973 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.62■□□□□ 0.73
CBX5P45973 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX5P45973 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX5P45973 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC19.62■□□□□ 0.73
CBX5P45973 AL157400.5-201ENST00000507624 621 ntBASIC19.62■□□□□ 0.73
CBX5P45973 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CBX5P45973 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.61■□□□□ 0.73
CBX5P45973 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
CBX5P45973 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 CR559946.2-201ENST00000623684 991 ntBASIC19.61■□□□□ 0.73
CBX5P45973 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CBX5P45973 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CBX5P45973 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CBX5P45973 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CBX5P45973 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CBX5P45973 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.6■□□□□ 0.73
CBX5P45973 SMPD5-203ENST00000639008 1464 ntBASIC19.6■□□□□ 0.73
CBX5P45973 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.6■□□□□ 0.73
CBX5P45973 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 KRT18P10-201ENST00000388836 1287 ntBASIC19.59■□□□□ 0.73
CBX5P45973 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CBX5P45973 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CBX5P45973 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
CBX5P45973 C9orf163-202ENST00000624034 2573 ntBASIC19.58■□□□□ 0.73
CBX5P45973 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CBX5P45973 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CBX5P45973 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CBX5P45973 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.73
CBX5P45973 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.58■□□□□ 0.72
CBX5P45973 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CBX5P45973 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CBX5P45973 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.57■□□□□ 0.72
CBX5P45973 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CBX5P45973 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 RPS2P35-201ENST00000443417 897 ntBASIC19.57■□□□□ 0.72
CBX5P45973 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.57■□□□□ 0.72
CBX5P45973 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CBX5P45973 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CBX5P45973 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CBX5P45973 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.56■□□□□ 0.72
CBX5P45973 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CBX5P45973 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.56■□□□□ 0.72
CBX5P45973 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.56■□□□□ 0.72
CBX5P45973 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CBX5P45973 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms