Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
HTR1EP28566 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR1EP28566 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.96■■□□□ 1.11
HTR1EP28566 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
HTR1EP28566 C9orf163-202ENST00000624034 2573 ntBASIC21.95■■□□□ 1.11
HTR1EP28566 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HTR1EP28566 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC21.95■■□□□ 1.1
HTR1EP28566 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.95■■□□□ 1.1
HTR1EP28566 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
HTR1EP28566 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.95■■□□□ 1.1
HTR1EP28566 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HTR1EP28566 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.94■■□□□ 1.1
HTR1EP28566 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.94■■□□□ 1.1
HTR1EP28566 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR1EP28566 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.94■■□□□ 1.1
HTR1EP28566 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR1EP28566 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HTR1EP28566 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.94■■□□□ 1.1
HTR1EP28566 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
HTR1EP28566 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.93■■□□□ 1.1
HTR1EP28566 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.93■■□□□ 1.1
HTR1EP28566 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 SPCS2P3-201ENST00000500401 656 ntBASIC21.93■■□□□ 1.1
HTR1EP28566 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.93■■□□□ 1.1
HTR1EP28566 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.93■■□□□ 1.1
HTR1EP28566 THA1P-201ENST00000590384 1145 ntBASIC21.93■■□□□ 1.1
HTR1EP28566 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HTR1EP28566 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
HTR1EP28566 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1EP28566 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1EP28566 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
HTR1EP28566 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1EP28566 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
HTR1EP28566 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1EP28566 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
HTR1EP28566 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1EP28566 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
HTR1EP28566 RAP2CP1-202ENST00000605179 643 ntBASIC21.92■■□□□ 1.1
HTR1EP28566 MIR6765-201ENST00000614092 87 ntBASIC21.92■■□□□ 1.1
HTR1EP28566 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HTR1EP28566 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HTR1EP28566 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.92■■□□□ 1.1
HTR1EP28566 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.92■■□□□ 1.1
HTR1EP28566 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.92■■□□□ 1.1
HTR1EP28566 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
HTR1EP28566 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1EP28566 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
HTR1EP28566 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1EP28566 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1EP28566 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1EP28566 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
HTR1EP28566 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
HTR1EP28566 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC21.9■■□□□ 1.1
HTR1EP28566 AC103834.1-201ENST00000520383 144 ntBASIC21.9■■□□□ 1.1
HTR1EP28566 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.9■■□□□ 1.1
HTR1EP28566 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.9■■□□□ 1.1
HTR1EP28566 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
HTR1EP28566 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTR1EP28566 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
HTR1EP28566 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.89■■□□□ 1.09
HTR1EP28566 GUSBP5-201ENST00000418136 578 ntBASIC21.89■■□□□ 1.09
HTR1EP28566 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.89■■□□□ 1.09
HTR1EP28566 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
HTR1EP28566 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTR1EP28566 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTR1EP28566 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
HTR1EP28566 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
HTR1EP28566 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
HTR1EP28566 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.88■■□□□ 1.09
HTR1EP28566 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
HTR1EP28566 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.88■■□□□ 1.09
HTR1EP28566 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.88■■□□□ 1.09
HTR1EP28566 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.88■■□□□ 1.09
HTR1EP28566 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
HTR1EP28566 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 829.5 ms