Protein–RNA interactions for Protein: P23258

TUBG1, Tubulin gamma-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBG1P23258 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBG1P23258 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBG1P23258 KRT125P-201ENST00000546827 989 ntBASIC19.87■□□□□ 0.77
TUBG1P23258 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBG1P23258 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TUBG1P23258 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TUBG1P23258 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.86■□□□□ 0.77
TUBG1P23258 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBG1P23258 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TUBG1P23258 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBG1P23258 AL139125.2-201ENST00000623134 1869 ntBASIC19.86■□□□□ 0.77
TUBG1P23258 LINC00543-201ENST00000567234 1845 ntBASIC19.86■□□□□ 0.77
TUBG1P23258 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.86■□□□□ 0.77
TUBG1P23258 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.86■□□□□ 0.77
TUBG1P23258 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBG1P23258 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
TUBG1P23258 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TUBG1P23258 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBG1P23258 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBG1P23258 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.86■□□□□ 0.77
TUBG1P23258 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TUBG1P23258 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.86■□□□□ 0.77
TUBG1P23258 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TUBG1P23258 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.85■□□□□ 0.77
TUBG1P23258 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.85■□□□□ 0.77
TUBG1P23258 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.85■□□□□ 0.77
TUBG1P23258 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TUBG1P23258 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TUBG1P23258 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
TUBG1P23258 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
TUBG1P23258 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TUBG1P23258 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.84■□□□□ 0.77
TUBG1P23258 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.84■□□□□ 0.77
TUBG1P23258 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
TUBG1P23258 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.84■□□□□ 0.77
TUBG1P23258 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC19.84■□□□□ 0.77
TUBG1P23258 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TUBG1P23258 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TUBG1P23258 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBG1P23258 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBG1P23258 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TUBG1P23258 AC009299.2-201ENST00000482477 511 ntBASIC19.83■□□□□ 0.77
TUBG1P23258 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TUBG1P23258 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TUBG1P23258 AL451085.2-201ENST00000605085 799 ntBASIC19.83■□□□□ 0.77
TUBG1P23258 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.83■□□□□ 0.76
TUBG1P23258 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.83■□□□□ 0.76
TUBG1P23258 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TUBG1P23258 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
TUBG1P23258 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TUBG1P23258 AC004448.1-201ENST00000458332 883 ntBASIC19.82■□□□□ 0.76
TUBG1P23258 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.82■□□□□ 0.76
TUBG1P23258 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBG1P23258 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBG1P23258 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TUBG1P23258 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBG1P23258 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.81■□□□□ 0.76
TUBG1P23258 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TUBG1P23258 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
TUBG1P23258 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBG1P23258 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBG1P23258 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBG1P23258 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBG1P23258 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.8■□□□□ 0.76
TUBG1P23258 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TUBG1P23258 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TUBG1P23258 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBG1P23258 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBG1P23258 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TUBG1P23258 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TUBG1P23258 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TUBG1P23258 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TUBG1P23258 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.79■□□□□ 0.76
TUBG1P23258 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.79■□□□□ 0.76
TUBG1P23258 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.79■□□□□ 0.76
TUBG1P23258 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TUBG1P23258 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TUBG1P23258 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TUBG1P23258 AC131274.2-201ENST00000580697 1507 ntBASIC19.78■□□□□ 0.76
TUBG1P23258 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms