Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.54■□□□□ 0.88
UBL3O95164 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBL3O95164 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBL3O95164 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
UBL3O95164 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.53■□□□□ 0.88
UBL3O95164 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBL3O95164 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.52■□□□□ 0.88
UBL3O95164 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.52■□□□□ 0.88
UBL3O95164 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBL3O95164 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBL3O95164 CLDN5-201ENST00000403084 2357 ntBASIC20.52■□□□□ 0.88
UBL3O95164 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
UBL3O95164 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
UBL3O95164 KRT8P33-201ENST00000508125 1423 ntBASIC20.52■□□□□ 0.87
UBL3O95164 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBL3O95164 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.51■□□□□ 0.87
UBL3O95164 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBL3O95164 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
UBL3O95164 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.51■□□□□ 0.87
UBL3O95164 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBL3O95164 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBL3O95164 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.51■□□□□ 0.87
UBL3O95164 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBL3O95164 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBL3O95164 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.5■□□□□ 0.87
UBL3O95164 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL3O95164 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL3O95164 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
UBL3O95164 AC011551.1-201ENST00000614101 683 ntBASIC20.5■□□□□ 0.87
UBL3O95164 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.5■□□□□ 0.87
UBL3O95164 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
UBL3O95164 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
UBL3O95164 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UBL3O95164 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.49■□□□□ 0.87
UBL3O95164 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.49■□□□□ 0.87
UBL3O95164 MIR6089-201ENST00000616698 64 ntBASIC20.49■□□□□ 0.87
UBL3O95164 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.49■□□□□ 0.87
UBL3O95164 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.49■□□□□ 0.87
UBL3O95164 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
UBL3O95164 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.48■□□□□ 0.87
UBL3O95164 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
UBL3O95164 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
UBL3O95164 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.48■□□□□ 0.87
UBL3O95164 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.48■□□□□ 0.87
UBL3O95164 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
UBL3O95164 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
UBL3O95164 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBL3O95164 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
UBL3O95164 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBL3O95164 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.47■□□□□ 0.87
UBL3O95164 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.47■□□□□ 0.87
UBL3O95164 AC103834.1-201ENST00000520383 144 ntBASIC20.47■□□□□ 0.87
UBL3O95164 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL3O95164 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBL3O95164 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL3O95164 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.46■□□□□ 0.87
UBL3O95164 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UBL3O95164 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.46■□□□□ 0.87
UBL3O95164 THA1P-201ENST00000590384 1145 ntBASIC20.46■□□□□ 0.87
UBL3O95164 AC090877.2-201ENST00000558441 1738 ntBASIC20.46■□□□□ 0.87
UBL3O95164 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.46■□□□□ 0.87
UBL3O95164 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBL3O95164 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBL3O95164 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.46■□□□□ 0.87
UBL3O95164 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBL3O95164 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.46■□□□□ 0.87
UBL3O95164 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
UBL3O95164 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBL3O95164 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 KRT18P24-201ENST00000344739 1156 ntBASIC20.45■□□□□ 0.86
UBL3O95164 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBL3O95164 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBL3O95164 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBL3O95164 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.45■□□□□ 0.86
UBL3O95164 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBL3O95164 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms