Protein–RNA interactions for Protein: O75387

SLC43A1, Large neutral amino acids transporter small subunit 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A1O75387 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC43A1O75387 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC43A1O75387 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SLC43A1O75387 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC43A1O75387 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC43A1O75387 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC43A1O75387 MIR4508-201ENST00000584178 70 ntBASIC20.75■□□□□ 0.91
SLC43A1O75387 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC43A1O75387 KRT8P33-201ENST00000508125 1423 ntBASIC20.75■□□□□ 0.91
SLC43A1O75387 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC43A1O75387 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC43A1O75387 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC43A1O75387 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC43A1O75387 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SLC43A1O75387 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC43A1O75387 AC090877.2-201ENST00000558441 1738 ntBASIC20.74■□□□□ 0.91
SLC43A1O75387 AC011551.1-201ENST00000614101 683 ntBASIC20.74■□□□□ 0.91
SLC43A1O75387 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC43A1O75387 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC43A1O75387 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC43A1O75387 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
SLC43A1O75387 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC43A1O75387 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC43A1O75387 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC43A1O75387 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC43A1O75387 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC43A1O75387 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC43A1O75387 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC43A1O75387 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.72■□□□□ 0.91
SLC43A1O75387 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC43A1O75387 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC43A1O75387 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC43A1O75387 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC43A1O75387 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
SLC43A1O75387 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.72■□□□□ 0.91
SLC43A1O75387 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC43A1O75387 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC43A1O75387 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SLC43A1O75387 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.7■□□□□ 0.91
SLC43A1O75387 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC43A1O75387 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC43A1O75387 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC43A1O75387 THA1P-201ENST00000590384 1145 ntBASIC20.7■□□□□ 0.9
SLC43A1O75387 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC43A1O75387 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC43A1O75387 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC43A1O75387 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SLC43A1O75387 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC43A1O75387 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.69■□□□□ 0.9
SLC43A1O75387 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 AC103834.1-201ENST00000520383 144 ntBASIC20.69■□□□□ 0.9
SLC43A1O75387 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC43A1O75387 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.69■□□□□ 0.9
SLC43A1O75387 DUSP8P5-201ENST00000422884 1815 ntBASIC20.69■□□□□ 0.9
SLC43A1O75387 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC43A1O75387 KRT18P24-201ENST00000344739 1156 ntBASIC20.68■□□□□ 0.9
SLC43A1O75387 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLC43A1O75387 AC120024.1-201ENST00000562672 995 ntBASIC20.68■□□□□ 0.9
SLC43A1O75387 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC43A1O75387 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC43A1O75387 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC43A1O75387 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC43A1O75387 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC43A1O75387 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC43A1O75387 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.67■□□□□ 0.9
SLC43A1O75387 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.67■□□□□ 0.9
SLC43A1O75387 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
SLC43A1O75387 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SLC43A1O75387 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SLC43A1O75387 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.66■□□□□ 0.9
SLC43A1O75387 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC43A1O75387 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.66■□□□□ 0.9
SLC43A1O75387 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
SLC43A1O75387 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC43A1O75387 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC43A1O75387 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SLC43A1O75387 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms