Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGA12O60330 DUSP8P4-201ENST00000399538 1761 ntBASIC22.78■■□□□ 1.24
PCDHGA12O60330 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC22.78■■□□□ 1.24
PCDHGA12O60330 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC22.78■■□□□ 1.24
PCDHGA12O60330 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
PCDHGA12O60330 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA12O60330 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA12O60330 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
PCDHGA12O60330 AC026271.2-201ENST00000428091 497 ntBASIC22.77■■□□□ 1.24
PCDHGA12O60330 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.77■■□□□ 1.24
PCDHGA12O60330 AC093323.1-202ENST00000635031 2045 ntBASIC22.77■■□□□ 1.24
PCDHGA12O60330 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PCDHGA12O60330 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA12O60330 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC22.76■■□□□ 1.23
PCDHGA12O60330 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA12O60330 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA12O60330 AC024257.2-201ENST00000549699 147 ntBASIC22.76■■□□□ 1.23
PCDHGA12O60330 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA12O60330 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
PCDHGA12O60330 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.76■■□□□ 1.23
PCDHGA12O60330 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA12O60330 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC22.75■■□□□ 1.23
PCDHGA12O60330 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA12O60330 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC22.75■■□□□ 1.23
PCDHGA12O60330 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
PCDHGA12O60330 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PCDHGA12O60330 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGA12O60330 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA12O60330 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.74■■□□□ 1.23
PCDHGA12O60330 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA12O60330 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA12O60330 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
PCDHGA12O60330 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
PCDHGA12O60330 AC092666.2-201ENST00000613287 246 ntBASIC22.74■■□□□ 1.23
PCDHGA12O60330 AC092803.2-201ENST00000564287 1899 ntBASIC22.74■■□□□ 1.23
PCDHGA12O60330 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.74■■□□□ 1.23
PCDHGA12O60330 AC097639.1-201ENST00000565519 1891 ntBASIC22.73■■□□□ 1.23
PCDHGA12O60330 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 AC004448.1-201ENST00000458332 883 ntBASIC22.73■■□□□ 1.23
PCDHGA12O60330 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 DUX4L19-201ENST00000557448 1267 ntBASIC22.73■■□□□ 1.23
PCDHGA12O60330 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PCDHGA12O60330 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC22.73■■□□□ 1.23
PCDHGA12O60330 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHGA12O60330 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
PCDHGA12O60330 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA12O60330 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA12O60330 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA12O60330 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PCDHGA12O60330 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA12O60330 HYI-206ENST00000372434 1025 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA12O60330 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 MIR5787-201ENST00000611784 55 ntBASIC22.71■■□□□ 1.23
PCDHGA12O60330 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA12O60330 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PCDHGA12O60330 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PCDHGA12O60330 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHGA12O60330 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHGA12O60330 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PCDHGA12O60330 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHGA12O60330 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC22.7■■□□□ 1.22
PCDHGA12O60330 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC22.69■■□□□ 1.22
PCDHGA12O60330 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA12O60330 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA12O60330 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA12O60330 AL136967.2-201ENST00000623968 743 ntBASIC22.69■■□□□ 1.22
PCDHGA12O60330 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PCDHGA12O60330 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC22.69■■□□□ 1.22
PCDHGA12O60330 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC22.69■■□□□ 1.22
PCDHGA12O60330 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA12O60330 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA12O60330 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA12O60330 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PCDHGA12O60330 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms