Protein–RNA interactions for Protein: O00629

KPNA4, Importin subunit alpha-3, humanhuman

Predicted RBP Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4O00629 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.32■■□□□ 1
KPNA4O00629 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.32■■□□□ 1
KPNA4O00629 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
KPNA4O00629 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.32■■□□□ 1
KPNA4O00629 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KPNA4O00629 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
KPNA4O00629 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.31■■□□□ 1
KPNA4O00629 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KPNA4O00629 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
KPNA4O00629 KRT18P10-201ENST00000388836 1287 ntBASIC21.31■■□□□ 1
KPNA4O00629 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
KPNA4O00629 AL592293.1-201ENST00000502889 1188 ntBASIC21.31■■□□□ 1
KPNA4O00629 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.31■■□□□ 1
KPNA4O00629 AL117328.2-201ENST00000624617 1940 ntBASIC21.31■■□□□ 1
KPNA4O00629 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
KPNA4O00629 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.3■■□□□ 1
KPNA4O00629 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KPNA4O00629 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KPNA4O00629 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KPNA4O00629 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
KPNA4O00629 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
KPNA4O00629 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
KPNA4O00629 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
KPNA4O00629 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.29■■□□□ 1
KPNA4O00629 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
KPNA4O00629 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
KPNA4O00629 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.29■■□□□ 1
KPNA4O00629 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
KPNA4O00629 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.29■■□□□ 1
KPNA4O00629 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.29■■□□□ 1
KPNA4O00629 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.29■■□□□ 1
KPNA4O00629 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
KPNA4O00629 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.28■■□□□ 1
KPNA4O00629 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
KPNA4O00629 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.28■■□□□ 1
KPNA4O00629 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
KPNA4O00629 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KPNA4O00629 PKD1P6-201ENST00000343738 4769 ntBASIC21.27■■□□□ 1
KPNA4O00629 RARRES2P2-201ENST00000394842 485 ntBASIC21.27■■□□□ 1
KPNA4O00629 SPCS2P3-201ENST00000500401 656 ntBASIC21.27■■□□□ 1
KPNA4O00629 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
KPNA4O00629 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KPNA4O00629 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KPNA4O00629 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
KPNA4O00629 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
KPNA4O00629 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.26■□□□□ 0.99
KPNA4O00629 HLA-L-211ENST00000482052 1765 ntBASIC21.26■□□□□ 0.99
KPNA4O00629 HSD17B1P1-201ENST00000590052 955 ntBASIC21.26■□□□□ 0.99
KPNA4O00629 AC018755.3-202ENST00000596210 929 ntBASIC21.26■□□□□ 0.99
KPNA4O00629 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC21.26■□□□□ 0.99
KPNA4O00629 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
KPNA4O00629 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
KPNA4O00629 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KPNA4O00629 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KPNA4O00629 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
KPNA4O00629 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KPNA4O00629 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.25■□□□□ 0.99
KPNA4O00629 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KPNA4O00629 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA4O00629 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA4O00629 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA4O00629 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA4O00629 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
KPNA4O00629 AC004812.2-201ENST00000611079 2094 ntBASIC21.24■□□□□ 0.99
KPNA4O00629 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KPNA4O00629 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA4O00629 AC141586.4-201ENST00000624558 1573 ntBASIC21.23■□□□□ 0.99
KPNA4O00629 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA4O00629 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.23■□□□□ 0.99
KPNA4O00629 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA4O00629 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KPNA4O00629 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms