Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
RTCAO00442 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.92■■□□□ 1.1
RTCAO00442 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
RTCAO00442 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
RTCAO00442 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.91■■□□□ 1.1
RTCAO00442 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCAO00442 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
RTCAO00442 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCAO00442 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.91■■□□□ 1.1
RTCAO00442 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCAO00442 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.91■■□□□ 1.1
RTCAO00442 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.91■■□□□ 1.1
RTCAO00442 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.91■■□□□ 1.1
RTCAO00442 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
RTCAO00442 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
RTCAO00442 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTCAO00442 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCAO00442 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTCAO00442 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
RTCAO00442 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.9■■□□□ 1.1
RTCAO00442 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
RTCAO00442 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
RTCAO00442 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCAO00442 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.9■■□□□ 1.1
RTCAO00442 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTCAO00442 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTCAO00442 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
RTCAO00442 AL022069.1-201ENST00000568025 1636 ntBASIC21.89■■□□□ 1.09
RTCAO00442 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTCAO00442 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCAO00442 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.89■■□□□ 1.09
RTCAO00442 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCAO00442 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCAO00442 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTCAO00442 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCAO00442 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
RTCAO00442 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCAO00442 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RTCAO00442 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
RTCAO00442 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RTCAO00442 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.88■■□□□ 1.09
RTCAO00442 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
RTCAO00442 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCAO00442 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.88■■□□□ 1.09
RTCAO00442 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCAO00442 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RTCAO00442 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RTCAO00442 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.88■■□□□ 1.09
RTCAO00442 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.87■■□□□ 1.09
RTCAO00442 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
RTCAO00442 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCAO00442 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.87■■□□□ 1.09
RTCAO00442 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCAO00442 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RTCAO00442 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTCAO00442 AL451085.2-201ENST00000605085 799 ntBASIC21.86■■□□□ 1.09
RTCAO00442 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTCAO00442 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RTCAO00442 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RTCAO00442 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.86■■□□□ 1.09
RTCAO00442 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RTCAO00442 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
RTCAO00442 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTCAO00442 AC137630.3-201ENST00000607245 391 ntBASIC21.85■■□□□ 1.09
RTCAO00442 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTCAO00442 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RTCAO00442 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTCAO00442 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTCAO00442 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RTCAO00442 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTCAO00442 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.84■■□□□ 1.09
RTCAO00442 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RTCAO00442 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RTCAO00442 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RTCAO00442 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.84■■□□□ 1.09
RTCAO00442 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
RTCAO00442 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RTCAO00442 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
RTCAO00442 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.83■■□□□ 1.09
RTCAO00442 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTCAO00442 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTCAO00442 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.83■■□□□ 1.09
RTCAO00442 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTCAO00442 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTCAO00442 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.83■■□□□ 1.09
RTCAO00442 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RTCAO00442 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RTCAO00442 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTCAO00442 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RTCAO00442 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RTCAO00442 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTCAO00442 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.82■■□□□ 1.08
RTCAO00442 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTCAO00442 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.82■■□□□ 1.08
RTCAO00442 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.82■■□□□ 1.08
RTCAO00442 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.82■■□□□ 1.08
RTCAO00442 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RTCAO00442 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RTCAO00442 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RTCAO00442 AL161729.1-201ENST00000604104 1402 ntBASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms