Protein–RNA interactions for Protein: A6NCQ9

RNF222, RING finger protein 222, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF222A6NCQ9 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNF222A6NCQ9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNF222A6NCQ9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF222A6NCQ9 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNF222A6NCQ9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF222A6NCQ9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF222A6NCQ9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF222A6NCQ9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF222A6NCQ9 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF222A6NCQ9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 AC242852.2-201ENST00000615738 1807 ntBASIC18.73■□□□□ 0.59
RNF222A6NCQ9 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.73■□□□□ 0.59
RNF222A6NCQ9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.72■□□□□ 0.59
RNF222A6NCQ9 AL121603.2-201ENST00000557373 2117 ntBASIC18.71■□□□□ 0.59
RNF222A6NCQ9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
RNF222A6NCQ9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 AC097358.2-201ENST00000607541 1159 ntBASIC18.7■□□□□ 0.58
RNF222A6NCQ9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RNF222A6NCQ9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 AL359258.2-201ENST00000564063 1566 ntBASIC18.69■□□□□ 0.58
RNF222A6NCQ9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.69■□□□□ 0.58
RNF222A6NCQ9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
RNF222A6NCQ9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
RNF222A6NCQ9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.68■□□□□ 0.58
RNF222A6NCQ9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
RNF222A6NCQ9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms