Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV13-2A0A0B4J235 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
TRAV13-2A0A0B4J235 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV13-2A0A0B4J235 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 AL024507.2-201ENST00000606070 2574 ntBASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV13-2A0A0B4J235 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRAV13-2A0A0B4J235 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 GUSBP5-202ENST00000510805 1989 ntBASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
TRAV13-2A0A0B4J235 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 CIB2-204ENST00000557846 934 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 AL359504.2-201ENST00000605506 1601 ntBASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 ECEL1P1-201ENST00000373592 1742 ntBASIC15.12■□□□□ 0.01
TRAV13-2A0A0B4J235 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV13-2A0A0B4J235 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms