Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 AC114947.1-202ENST00000514136 344 ntBASIC18.91■□□□□ 0.62
SCN11AQ9UI33 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.91■□□□□ 0.62
SCN11AQ9UI33 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 AL627231.1-201ENST00000394467 1125 ntBASIC18.91■□□□□ 0.62
SCN11AQ9UI33 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 CHCHD2P9-201ENST00000461726 456 ntBASIC18.91■□□□□ 0.62
SCN11AQ9UI33 RN7SL277P-201ENST00000481521 288 ntBASIC18.91■□□□□ 0.62
SCN11AQ9UI33 AC135983.4-201ENST00000564116 1262 ntBASIC18.91■□□□□ 0.62
SCN11AQ9UI33 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SCN11AQ9UI33 AP002353.1-201ENST00000528257 1599 ntBASIC18.9■□□□□ 0.62
SCN11AQ9UI33 AC011270.2-201ENST00000624293 2550 ntBASIC18.9■□□□□ 0.62
SCN11AQ9UI33 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 AP002803.1-201ENST00000528836 498 ntBASIC18.9■□□□□ 0.62
SCN11AQ9UI33 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SCN11AQ9UI33 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC18.89■□□□□ 0.62
SCN11AQ9UI33 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
SCN11AQ9UI33 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN11AQ9UI33 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.89■□□□□ 0.62
SCN11AQ9UI33 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
SCN11AQ9UI33 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 DNAJB1P1-201ENST00000429417 1024 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 LINC01783-202ENST00000614408 828 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 MIR6769A-201ENST00000617340 73 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 BX284668.2-205ENST00000619677 828 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 AC090386.2-201ENST00000623010 1039 ntBASIC18.89■□□□□ 0.61
SCN11AQ9UI33 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SCN11AQ9UI33 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms