Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AC079776.1-201ENST00000401540 1152 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 NUS1P3-201ENST00000423502 862 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 PUDP-206ENST00000540122 825 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AC022532.1-201ENST00000624563 1728 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AL109954.1-202ENST00000564051 2148 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 SBF1P1-201ENST00000444527 5631 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 AC097376.2-205ENST00000610159 5334 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 LRRC59-203ENST00000576448 1531 ntBASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HCN3Q9P1Z3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AC005229.1-201ENST00000392885 409 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AC104457.1-201ENST00000401024 814 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AL139094.1-201ENST00000405549 1188 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 ACA64.2-201ENST00000459014 129 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AL512343.1-201ENST00000605837 169 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 AC091951.1-201ENST00000512854 2465 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.44□□□□□ -0.1
HCN3Q9P1Z3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms