Protein–RNA interactions for Protein: Q9BW85

CCDC94, Coiled-coil domain-containing protein 94, humanhuman

Predicted RBP Predictions only

Length 323 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC94Q9BW85 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 MEIS3P1-201ENST00000495167 958 ntBASIC17.25■□□□□ 0.35
CCDC94Q9BW85 API5-211ENST00000534695 560 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 LINC01115-203ENST00000606068 577 ntBASIC17.25■□□□□ 0.35
CCDC94Q9BW85 AL358472.5-202ENST00000641448 1267 ntBASIC17.25■□□□□ 0.35
CCDC94Q9BW85 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 BX640514.1-201ENST00000583223 1918 ntBASIC17.25■□□□□ 0.35
CCDC94Q9BW85 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC94Q9BW85 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 HNRNPUP1-201ENST00000554987 333 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 AC023310.3-201ENST00000557027 670 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 AC100756.1-201ENST00000562736 682 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 AC138749.3-201ENST00000567691 622 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 AC140912.1-201ENST00000577171 1054 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 AC116165.1-201ENST00000611806 668 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 SLC7A15P-201ENST00000424028 1363 ntBASIC17.24■□□□□ 0.35
CCDC94Q9BW85 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC94Q9BW85 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AC136604.1-201ENST00000418535 575 ntBASIC17.23■□□□□ 0.35
CCDC94Q9BW85 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 RPL13P2-201ENST00000440687 659 ntBASIC17.23■□□□□ 0.35
CCDC94Q9BW85 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 TP53TG3HP-202ENST00000569755 579 ntBASIC17.23■□□□□ 0.35
CCDC94Q9BW85 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AC025048.6-201ENST00000634326 1161 ntBASIC17.23■□□□□ 0.35
CCDC94Q9BW85 AC092127.1-201ENST00000567093 3455 ntBASIC17.23■□□□□ 0.35
CCDC94Q9BW85 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC94Q9BW85 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms