Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SMIM4Q8WVI0 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AC068760.1-201ENST00000493579 1953 ntBASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 HIST3H2BA-201ENST00000436555 524 ntBASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AC098831.1-202ENST00000438821 336 ntBASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 SKP2-204ENST00000508514 821 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AP002472.1-201ENST00000577490 586 ntBASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CICP16-201ENST00000502609 2813 ntBASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 CR383656.2-201ENST00000548656 2254 ntBASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SMIM4Q8WVI0 AC004241.5-201ENST00000623870 2448 ntBASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SMIM4Q8WVI0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms