Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 AC097359.2-201ENST00000604992 2389 ntBASIC13.99□□□□□ -0.17
SMIM11AP58511 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.99□□□□□ -0.17
SMIM11AP58511 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.99□□□□□ -0.17
SMIM11AP58511 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.99□□□□□ -0.17
SMIM11AP58511 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.99□□□□□ -0.17
SMIM11AP58511 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.99□□□□□ -0.17
SMIM11AP58511 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.99□□□□□ -0.17
SMIM11AP58511 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 TIMM17BP1-201ENST00000545713 516 ntBASIC13.99□□□□□ -0.17
SMIM11AP58511 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SMIM11AP58511 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.99□□□□□ -0.17
SMIM11AP58511 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SMIM11AP58511 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.98□□□□□ -0.17
SMIM11AP58511 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 AC051619.7-201ENST00000568314 623 ntBASIC13.98□□□□□ -0.17
SMIM11AP58511 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 AC004461.2-201ENST00000629517 803 ntBASIC13.98□□□□□ -0.17
SMIM11AP58511 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 AP001267.2-201ENST00000532619 2086 ntBASIC13.98□□□□□ -0.17
SMIM11AP58511 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.98□□□□□ -0.17
SMIM11AP58511 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.98□□□□□ -0.17
SMIM11AP58511 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
SMIM11AP58511 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SMIM11AP58511 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.98□□□□□ -0.17
SMIM11AP58511 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SMIM11AP58511 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms