Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 AL645728.2-202ENST00000641679 227 ntBASIC12.46□□□□□ -0.41
NKX2-1P43699 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.46□□□□□ -0.41
NKX2-1P43699 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.46□□□□□ -0.41
NKX2-1P43699 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.42
NKX2-1P43699 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
NKX2-1P43699 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
NKX2-1P43699 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.46□□□□□ -0.42
NKX2-1P43699 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.46□□□□□ -0.42
NKX2-1P43699 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.46□□□□□ -0.42
NKX2-1P43699 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.46□□□□□ -0.42
NKX2-1P43699 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NKX2-1P43699 AC023090.2-201ENST00000625182 2110 ntBASIC12.46□□□□□ -0.42
NKX2-1P43699 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.46□□□□□ -0.42
NKX2-1P43699 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
NKX2-1P43699 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 TFAMP1-201ENST00000412727 736 ntBASIC12.45□□□□□ -0.42
NKX2-1P43699 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.45□□□□□ -0.42
NKX2-1P43699 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC12.45□□□□□ -0.42
NKX2-1P43699 PDPK2P-202ENST00000562415 1191 ntBASIC12.45□□□□□ -0.42
NKX2-1P43699 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 KLK8-205ENST00000593490 267 ntTSL 3 BASIC12.45□□□□□ -0.42
NKX2-1P43699 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
NKX2-1P43699 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.45□□□□□ -0.42
NKX2-1P43699 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 C8orf49-201ENST00000525043 1968 ntBASIC12.45□□□□□ -0.42
NKX2-1P43699 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC12.45□□□□□ -0.42
NKX2-1P43699 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NKX2-1P43699 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NKX2-1P43699 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.45□□□□□ -0.42
NKX2-1P43699 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NKX2-1P43699 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC12.44□□□□□ -0.42
NKX2-1P43699 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms