Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 AC051619.9-201ENST00000623237 597 ntBASIC18.9■□□□□ 0.62
COL15A1P39059 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC18.9■□□□□ 0.62
COL15A1P39059 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
COL15A1P39059 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.9■□□□□ 0.62
COL15A1P39059 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.89■□□□□ 0.62
COL15A1P39059 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
COL15A1P39059 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
COL15A1P39059 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COL15A1P39059 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC18.89■□□□□ 0.61
COL15A1P39059 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC18.89■□□□□ 0.61
COL15A1P39059 OR2K2-202ENST00000374428 1038 ntBASIC18.89■□□□□ 0.61
COL15A1P39059 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.89■□□□□ 0.61
COL15A1P39059 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
COL15A1P39059 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC18.89■□□□□ 0.61
COL15A1P39059 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 AC009884.2-201ENST00000603110 324 ntBASIC18.89■□□□□ 0.61
COL15A1P39059 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
COL15A1P39059 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
COL15A1P39059 AC092384.3-202ENST00000564646 2873 ntBASIC18.89■□□□□ 0.61
COL15A1P39059 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
COL15A1P39059 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.61
COL15A1P39059 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
COL15A1P39059 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.88■□□□□ 0.61
COL15A1P39059 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC18.88■□□□□ 0.61
COL15A1P39059 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.88■□□□□ 0.61
COL15A1P39059 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC18.88■□□□□ 0.61
COL15A1P39059 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC18.88■□□□□ 0.61
COL15A1P39059 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC18.88■□□□□ 0.61
COL15A1P39059 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 RPSAP31-201ENST00000416648 895 ntBASIC18.88■□□□□ 0.61
COL15A1P39059 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.88■□□□□ 0.61
COL15A1P39059 AL157407.1-201ENST00000435784 904 ntBASIC18.88■□□□□ 0.61
COL15A1P39059 SKA2-202ENST00000437036 625 ntTSL 2 BASIC18.88■□□□□ 0.61
COL15A1P39059 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 AC006122.1-201ENST00000493323 440 ntBASIC18.88■□□□□ 0.61
COL15A1P39059 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC18.88■□□□□ 0.61
COL15A1P39059 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC18.88■□□□□ 0.61
COL15A1P39059 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC18.88■□□□□ 0.61
COL15A1P39059 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC18.88■□□□□ 0.61
COL15A1P39059 AC007718.1-201ENST00000621078 280 ntBASIC18.88■□□□□ 0.61
COL15A1P39059 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
COL15A1P39059 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC18.88■□□□□ 0.61
COL15A1P39059 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.88■□□□□ 0.61
COL15A1P39059 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
COL15A1P39059 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 CAP2P1-201ENST00000557743 1390 ntBASIC18.87■□□□□ 0.61
COL15A1P39059 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
COL15A1P39059 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
COL15A1P39059 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms