Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 MBLAC2-202ENST00000514906 1936 ntBASIC14.78□□□□□ -0.04
EPHA3P29320 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
EPHA3P29320 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EPHA3P29320 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.77□□□□□ -0.04
EPHA3P29320 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.77□□□□□ -0.04
EPHA3P29320 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
EPHA3P29320 CICP17-201ENST00000418553 2377 ntBASIC14.77□□□□□ -0.04
EPHA3P29320 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
EPHA3P29320 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.77□□□□□ -0.04
EPHA3P29320 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.77□□□□□ -0.04
EPHA3P29320 AC089987.1-201ENST00000551654 2209 ntBASIC14.77□□□□□ -0.04
EPHA3P29320 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
EPHA3P29320 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
EPHA3P29320 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 AL360270.3-201ENST00000609118 1348 ntBASIC14.77□□□□□ -0.04
EPHA3P29320 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EPHA3P29320 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
EPHA3P29320 TOMM22P5-201ENST00000416399 439 ntBASIC14.77□□□□□ -0.05
EPHA3P29320 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.77□□□□□ -0.05
EPHA3P29320 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.77□□□□□ -0.05
EPHA3P29320 AC005829.1-201ENST00000570002 483 ntBASIC14.77□□□□□ -0.05
EPHA3P29320 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.77□□□□□ -0.05
EPHA3P29320 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.77□□□□□ -0.05
EPHA3P29320 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
EPHA3P29320 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
EPHA3P29320 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.77□□□□□ -0.05
EPHA3P29320 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.77□□□□□ -0.05
EPHA3P29320 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.77□□□□□ -0.05
EPHA3P29320 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EPHA3P29320 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 AL354702.1-201ENST00000442006 1960 ntBASIC14.76□□□□□ -0.05
EPHA3P29320 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.76□□□□□ -0.05
EPHA3P29320 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
EPHA3P29320 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.76□□□□□ -0.05
EPHA3P29320 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.76□□□□□ -0.05
EPHA3P29320 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.76□□□□□ -0.05
EPHA3P29320 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.76□□□□□ -0.05
EPHA3P29320 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EPHA3P29320 KRT18P58-201ENST00000527480 1120 ntBASIC14.76□□□□□ -0.05
EPHA3P29320 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.76□□□□□ -0.05
EPHA3P29320 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.76□□□□□ -0.05
EPHA3P29320 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms