Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KRT4P19013 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
KRT4P19013 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
KRT4P19013 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.24■□□□□ 0.03
KRT4P19013 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 RPL13P2-201ENST00000440687 659 ntBASIC15.24■□□□□ 0.03
KRT4P19013 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 AC025048.3-201ENST00000590609 569 ntBASIC15.24■□□□□ 0.03
KRT4P19013 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 AC005702.4-201ENST00000618393 416 ntBASIC15.24■□□□□ 0.03
KRT4P19013 LINC00628-201ENST00000628516 1289 ntBASIC15.24■□□□□ 0.03
KRT4P19013 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 AL137784.3-201ENST00000623858 2288 ntBASIC15.24■□□□□ 0.03
KRT4P19013 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
KRT4P19013 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.24■□□□□ 0.03
KRT4P19013 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
KRT4P19013 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 AC023090.2-201ENST00000625182 2110 ntBASIC15.23■□□□□ 0.03
KRT4P19013 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
KRT4P19013 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT4P19013 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT4P19013 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.23■□□□□ 0.03
KRT4P19013 SAMD11P1-201ENST00000571429 661 ntBASIC15.23■□□□□ 0.03
KRT4P19013 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.23■□□□□ 0.03
KRT4P19013 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 AL354702.1-201ENST00000442006 1960 ntBASIC15.23■□□□□ 0.03
KRT4P19013 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.23■□□□□ 0.03
KRT4P19013 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.23■□□□□ 0.03
KRT4P19013 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.23■□□□□ 0.03
KRT4P19013 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
KRT4P19013 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.22■□□□□ 0.03
KRT4P19013 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 AL360270.3-201ENST00000609118 1348 ntBASIC15.22■□□□□ 0.03
KRT4P19013 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 AL157414.3-201ENST00000624276 1954 ntBASIC15.22■□□□□ 0.03
KRT4P19013 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
KRT4P19013 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms