Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 RPSAP52-203ENST00000622976 1023 ntBASIC15.9■□□□□ 0.14
PDGFRAP16234 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.9■□□□□ 0.14
PDGFRAP16234 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFRAP16234 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PDGFRAP16234 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PDGFRAP16234 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.9■□□□□ 0.14
PDGFRAP16234 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PDGFRAP16234 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PDGFRAP16234 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.89■□□□□ 0.13
PDGFRAP16234 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.89■□□□□ 0.13
PDGFRAP16234 U91328.1-201ENST00000437528 223 ntBASIC15.89■□□□□ 0.13
PDGFRAP16234 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.89■□□□□ 0.13
PDGFRAP16234 AC022616.1-201ENST00000518688 554 ntBASIC15.89■□□□□ 0.13
PDGFRAP16234 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.89■□□□□ 0.13
PDGFRAP16234 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 AC009486.1-201ENST00000569860 813 ntBASIC15.89■□□□□ 0.13
PDGFRAP16234 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.89■□□□□ 0.13
PDGFRAP16234 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
PDGFRAP16234 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
PDGFRAP16234 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
PDGFRAP16234 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
PDGFRAP16234 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PDGFRAP16234 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.88■□□□□ 0.13
PDGFRAP16234 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 AC018529.2-202ENST00000611482 3087 ntBASIC15.88■□□□□ 0.13
PDGFRAP16234 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.88■□□□□ 0.13
PDGFRAP16234 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.88■□□□□ 0.13
PDGFRAP16234 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 KRT18P25-201ENST00000508931 1278 ntBASIC15.88■□□□□ 0.13
PDGFRAP16234 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.88■□□□□ 0.13
PDGFRAP16234 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.88■□□□□ 0.13
PDGFRAP16234 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.88■□□□□ 0.13
PDGFRAP16234 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
PDGFRAP16234 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms