Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CFTRP13569 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CFTRP13569 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CFTRP13569 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC25.01■■□□□ 1.59
CFTRP13569 NDUFB10P1-201ENST00000567319 521 ntBASIC25.01■■□□□ 1.59
CFTRP13569 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC25.01■■□□□ 1.59
CFTRP13569 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CFTRP13569 AC023024.2-201ENST00000623561 1993 ntBASIC25.01■■□□□ 1.59
CFTRP13569 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC25.01■■□□□ 1.59
CFTRP13569 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC25.01■■□□□ 1.59
CFTRP13569 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC25■■□□□ 1.59
CFTRP13569 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC25■■□□□ 1.59
CFTRP13569 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC25■■□□□ 1.59
CFTRP13569 API5-203ENST00000455725 2257 ntTSL 2 BASIC25■■□□□ 1.59
CFTRP13569 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
CFTRP13569 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CFTRP13569 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC25■■□□□ 1.59
CFTRP13569 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC25■■□□□ 1.59
CFTRP13569 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC25■■□□□ 1.59
CFTRP13569 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC25■■□□□ 1.59
CFTRP13569 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
CFTRP13569 FOXN3-AS2-201ENST00000554071 1262 ntBASIC25■■□□□ 1.59
CFTRP13569 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC25■■□□□ 1.59
CFTRP13569 AP005212.2-201ENST00000584979 510 ntBASIC25■■□□□ 1.59
CFTRP13569 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CFTRP13569 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC25■■□□□ 1.59
CFTRP13569 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC25■■□□□ 1.59
CFTRP13569 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC25■■□□□ 1.59
CFTRP13569 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CFTRP13569 AC004554.1-201ENST00000422830 1468 ntBASIC24.99■■□□□ 1.59
CFTRP13569 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CFTRP13569 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC24.99■■□□□ 1.59
CFTRP13569 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC24.99■■□□□ 1.59
CFTRP13569 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC24.99■■□□□ 1.59
CFTRP13569 KRT8P2-201ENST00000556193 944 ntBASIC24.99■■□□□ 1.59
CFTRP13569 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC24.99■■□□□ 1.59
CFTRP13569 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC24.99■■□□□ 1.59
CFTRP13569 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC24.99■■□□□ 1.59
CFTRP13569 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC24.99■■□□□ 1.59
CFTRP13569 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CFTRP13569 FUCA1P1-201ENST00000374476 1351 ntBASIC24.98■■□□□ 1.59
CFTRP13569 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
CFTRP13569 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
CFTRP13569 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC24.98■■□□□ 1.59
CFTRP13569 MIR1301-201ENST00000408518 82 ntBASIC24.98■■□□□ 1.59
CFTRP13569 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC24.98■■□□□ 1.59
CFTRP13569 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC24.98■■□□□ 1.59
CFTRP13569 AC008972.2-201ENST00000606587 494 ntBASIC24.98■■□□□ 1.59
CFTRP13569 AL591471.1-201ENST00000621855 229 ntBASIC24.98■■□□□ 1.59
CFTRP13569 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CFTRP13569 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC24.97■■□□□ 1.59
CFTRP13569 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC24.97■■□□□ 1.59
CFTRP13569 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC24.97■■□□□ 1.59
CFTRP13569 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC24.97■■□□□ 1.59
CFTRP13569 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC24.97■■□□□ 1.59
CFTRP13569 COX5A-205ENST00000568517 582 ntTSL 3 BASIC24.97■■□□□ 1.59
CFTRP13569 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC24.97■■□□□ 1.59
CFTRP13569 AC020658.6-201ENST00000623564 1870 ntBASIC24.97■■□□□ 1.59
CFTRP13569 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 PHB-210ENST00000511832 1509 ntTSL 2 BASIC24.97■■□□□ 1.59
CFTRP13569 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC24.97■■□□□ 1.59
CFTRP13569 WASH3P-207ENST00000560956 1394 ntBASIC24.97■■□□□ 1.59
CFTRP13569 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
CFTRP13569 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC24.97■■□□□ 1.59
CFTRP13569 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC24.97■■□□□ 1.59
CFTRP13569 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC24.97■■□□□ 1.59
CFTRP13569 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC24.97■■□□□ 1.59
CFTRP13569 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC24.97■■□□□ 1.59
CFTRP13569 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC24.96■■□□□ 1.59
CFTRP13569 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC24.96■■□□□ 1.59
CFTRP13569 AC063952.3-201ENST00000467756 308 ntBASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms