Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.36□□□□□ -0.11
MT-ND1P03886 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
MT-ND1P03886 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
MT-ND1P03886 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 AC087386.2-201ENST00000623212 4637 ntBASIC14.35□□□□□ -0.11
MT-ND1P03886 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 AL627223.1-201ENST00000416693 442 ntBASIC14.35□□□□□ -0.11
MT-ND1P03886 HIST3H2BA-201ENST00000436555 524 ntBASIC14.35□□□□□ -0.11
MT-ND1P03886 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.35□□□□□ -0.11
MT-ND1P03886 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.35□□□□□ -0.11
MT-ND1P03886 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.35□□□□□ -0.11
MT-ND1P03886 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.35□□□□□ -0.11
MT-ND1P03886 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
MT-ND1P03886 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 AC105021.1-202ENST00000570572 669 ntBASIC14.35□□□□□ -0.11
MT-ND1P03886 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 MIR4469-201ENST00000583919 79 ntBASIC14.35□□□□□ -0.11
MT-ND1P03886 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.35□□□□□ -0.11
MT-ND1P03886 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 AC012508.2-201ENST00000567613 1472 ntBASIC14.35□□□□□ -0.11
MT-ND1P03886 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
MT-ND1P03886 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
MT-ND1P03886 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
MT-ND1P03886 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
MT-ND1P03886 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
MT-ND1P03886 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.34□□□□□ -0.11
MT-ND1P03886 AC004461.1-201ENST00000412461 403 ntBASIC14.34□□□□□ -0.11
MT-ND1P03886 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.34□□□□□ -0.11
MT-ND1P03886 FAM58DP-201ENST00000428076 619 ntBASIC14.34□□□□□ -0.11
MT-ND1P03886 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.34□□□□□ -0.11
MT-ND1P03886 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.34□□□□□ -0.11
MT-ND1P03886 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
MT-ND1P03886 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.34□□□□□ -0.11
MT-ND1P03886 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms