Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
IFNA1P01562 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 AC016397.2-201ENST00000624848 1985 ntBASIC12.03□□□□□ -0.48
IFNA1P01562 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
IFNA1P01562 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
IFNA1P01562 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC12.02□□□□□ -0.48
IFNA1P01562 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 DLGAP2-214ENST00000612087 10088 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
IFNA1P01562 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.02□□□□□ -0.48
IFNA1P01562 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
IFNA1P01562 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
IFNA1P01562 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
IFNA1P01562 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
IFNA1P01562 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 ATP6V0CP3-201ENST00000417255 467 ntBASIC12.02□□□□□ -0.49
IFNA1P01562 RPS8P6-201ENST00000426177 609 ntBASIC12.02□□□□□ -0.49
IFNA1P01562 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.02□□□□□ -0.49
IFNA1P01562 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.02□□□□□ -0.49
IFNA1P01562 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.02□□□□□ -0.49
IFNA1P01562 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
IFNA1P01562 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 LMCD1-201ENST00000157600 8405 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.02□□□□□ -0.49
IFNA1P01562 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.02□□□□□ -0.49
IFNA1P01562 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
IFNA1P01562 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
IFNA1P01562 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 TCAM1P-207ENST00000485295 1537 ntBASIC12.01□□□□□ -0.49
IFNA1P01562 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.01□□□□□ -0.49
IFNA1P01562 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.01□□□□□ -0.49
IFNA1P01562 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.01□□□□□ -0.49
IFNA1P01562 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
IFNA1P01562 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms