Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
RTN3O95197 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN3O95197 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN3O95197 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN3O95197 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.99■□□□□ 0.15
RTN3O95197 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN3O95197 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.99■□□□□ 0.15
RTN3O95197 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RTN3O95197 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
RTN3O95197 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RTN3O95197 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RTN3O95197 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RTN3O95197 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN3O95197 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN3O95197 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RTN3O95197 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 AC026954.1-201ENST00000429771 1293 ntBASIC15.98■□□□□ 0.15
RTN3O95197 HLA-K-203ENST00000430151 1046 ntBASIC15.98■□□□□ 0.15
RTN3O95197 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 EIF3FP3-201ENST00000434851 1086 ntBASIC15.98■□□□□ 0.15
RTN3O95197 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.98■□□□□ 0.15
RTN3O95197 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.98■□□□□ 0.15
RTN3O95197 AC006453.4-201ENST00000636949 1252 ntBASIC15.98■□□□□ 0.15
RTN3O95197 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
RTN3O95197 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.98■□□□□ 0.15
RTN3O95197 AC126365.1-201ENST00000578585 1514 ntBASIC15.98■□□□□ 0.15
RTN3O95197 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RTN3O95197 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.98■□□□□ 0.15
RTN3O95197 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RTN3O95197 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 SSR4P1-203ENST00000599569 2260 ntBASIC15.97■□□□□ 0.15
RTN3O95197 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RTN3O95197 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RTN3O95197 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 AC245100.3-201ENST00000441281 285 ntBASIC15.97■□□□□ 0.15
RTN3O95197 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.97■□□□□ 0.15
RTN3O95197 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.97■□□□□ 0.15
RTN3O95197 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.97■□□□□ 0.15
RTN3O95197 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.97■□□□□ 0.15
RTN3O95197 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 REXO1L4P-201ENST00000605109 1937 ntBASIC15.97■□□□□ 0.15
RTN3O95197 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.97■□□□□ 0.15
RTN3O95197 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 KRT8P44-201ENST00000441609 1350 ntBASIC15.97■□□□□ 0.15
RTN3O95197 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RTN3O95197 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.97■□□□□ 0.15
RTN3O95197 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.97■□□□□ 0.15
RTN3O95197 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RTN3O95197 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms