Protein–RNA interactions for Protein: A6NHT5

HMX3, Homeobox protein HMX3, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMX3A6NHT5 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 FAM90A12P-201ENST00000519497 2375 ntBASIC13.2□□□□□ -0.3
HMX3A6NHT5 FAM90A24P-201ENST00000520792 2369 ntBASIC13.2□□□□□ -0.3
HMX3A6NHT5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 AL031595.1-201ENST00000623969 4709 ntBASIC13.2□□□□□ -0.3
HMX3A6NHT5 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
HMX3A6NHT5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
HMX3A6NHT5 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 RPL5P21-201ENST00000404620 815 ntBASIC13.19□□□□□ -0.3
HMX3A6NHT5 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 AC093909.1-201ENST00000504731 1122 ntBASIC13.19□□□□□ -0.3
HMX3A6NHT5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 AP001005.1-201ENST00000571755 1248 ntBASIC13.19□□□□□ -0.3
HMX3A6NHT5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 ACTL9-202ENST00000612068 1252 ntBASIC13.19□□□□□ -0.3
HMX3A6NHT5 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
HMX3A6NHT5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
HMX3A6NHT5 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.18□□□□□ -0.3
HMX3A6NHT5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
HMX3A6NHT5 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms