Protein–RNA interactions for Protein: A6NH52

TVP23A, Golgi apparatus membrane protein TVP23 homolog A, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23AA6NH52 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 AC018442.1-201ENST00000421439 2061 ntBASIC13.59□□□□□ -0.23
TVP23AA6NH52 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 FAM86GP-201ENST00000448322 971 ntBASIC13.59□□□□□ -0.23
TVP23AA6NH52 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 AL590560.3-201ENST00000623350 461 ntBASIC13.59□□□□□ -0.23
TVP23AA6NH52 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TVP23AA6NH52 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TVP23AA6NH52 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TVP23AA6NH52 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
TVP23AA6NH52 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TVP23AA6NH52 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TVP23AA6NH52 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TVP23AA6NH52 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TVP23AA6NH52 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.58□□□□□ -0.23
TVP23AA6NH52 AL157414.3-201ENST00000624276 1954 ntBASIC13.58□□□□□ -0.24
TVP23AA6NH52 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 MIR943-201ENST00000401286 94 ntBASIC13.58□□□□□ -0.24
TVP23AA6NH52 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 AC067863.1-201ENST00000494933 530 ntBASIC13.58□□□□□ -0.24
TVP23AA6NH52 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 AC000095.1-201ENST00000603208 874 ntBASIC13.58□□□□□ -0.24
TVP23AA6NH52 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.58□□□□□ -0.24
TVP23AA6NH52 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TVP23AA6NH52 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms