Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
R3HCC1Q9Y3T6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 AL139010.1-201ENST00000454878 894 ntBASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 AC061975.2-201ENST00000581722 295 ntBASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 AC015911.4-201ENST00000588022 1070 ntBASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
R3HCC1Q9Y3T6 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 AC245100.5-201ENST00000452108 331 ntBASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 IGHV3-42-201ENST00000520410 361 ntBASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 AC069120.2-201ENST00000524091 540 ntBASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
R3HCC1Q9Y3T6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
R3HCC1Q9Y3T6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms