Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AC139749.1-202ENST00000617529 3139 ntBASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 TARDBPP1-201ENST00000442013 1203 ntBASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 BX640514.1-201ENST00000583223 1918 ntBASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.66□□□□□ -0.38
LIN7CQ9NUP9 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 REXO1L4P-201ENST00000605109 1937 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 TSSK5P-201ENST00000423978 907 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 HIST3H2BA-201ENST00000436555 524 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 INGX-202ENST00000489074 768 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AL512361.1-201ENST00000554200 418 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AC010336.2-201ENST00000564226 506 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms