Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
HPS4Q9NQG7 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 COX5BP1-201ENST00000507622 393 ntBASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AP003171.2-201ENST00000528208 925 ntBASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AL021578.1-201ENST00000613646 709 ntBASIC15.69■□□□□ 0.1
HPS4Q9NQG7 AL645728.2-202ENST00000641679 227 ntBASIC15.69■□□□□ 0.1
HPS4Q9NQG7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
HPS4Q9NQG7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 AP002414.2-201ENST00000591780 3365 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 AC138028.6-201ENST00000616106 1482 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 AC004945.1-201ENST00000416738 983 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 FNTAP2-201ENST00000430308 634 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 BX284668.4-201ENST00000453917 508 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SCARNA20.5-201ENST00000516991 142 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
HPS4Q9NQG7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms