Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERCC4Q92889 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ERCC4Q92889 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.25■□□□□ 0.35
ERCC4Q92889 SNHG9-202ENST00000564014 471 ntBASIC17.25■□□□□ 0.35
ERCC4Q92889 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.25■□□□□ 0.35
ERCC4Q92889 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ERCC4Q92889 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ERCC4Q92889 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ERCC4Q92889 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.25■□□□□ 0.35
ERCC4Q92889 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.24■□□□□ 0.35
ERCC4Q92889 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.24■□□□□ 0.35
ERCC4Q92889 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
ERCC4Q92889 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC4Q92889 TOMM22P5-201ENST00000416399 439 ntBASIC17.24■□□□□ 0.35
ERCC4Q92889 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 RN7SL618P-201ENST00000477850 296 ntBASIC17.24■□□□□ 0.35
ERCC4Q92889 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.24■□□□□ 0.35
ERCC4Q92889 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
ERCC4Q92889 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 AC074044.1-201ENST00000609673 707 ntBASIC17.24■□□□□ 0.35
ERCC4Q92889 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 AL691403.2-201ENST00000618460 490 ntBASIC17.24■□□□□ 0.35
ERCC4Q92889 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.24■□□□□ 0.35
ERCC4Q92889 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
ERCC4Q92889 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ERCC4Q92889 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 TUBB3P1-201ENST00000405796 1332 ntBASIC17.23■□□□□ 0.35
ERCC4Q92889 PES1-204ENST00000402284 2144 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC4Q92889 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 AC104457.1-201ENST00000401024 814 ntBASIC17.23■□□□□ 0.35
ERCC4Q92889 TSEN15P1-201ENST00000423257 515 ntBASIC17.23■□□□□ 0.35
ERCC4Q92889 AC092580.3-201ENST00000430932 139 ntBASIC17.23■□□□□ 0.35
ERCC4Q92889 KRT18P43-201ENST00000469825 1281 ntBASIC17.23■□□□□ 0.35
ERCC4Q92889 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.23■□□□□ 0.35
ERCC4Q92889 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
ERCC4Q92889 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
ERCC4Q92889 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.23■□□□□ 0.35
ERCC4Q92889 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 AC006504.5-208ENST00000588784 2401 ntBASIC17.23■□□□□ 0.35
ERCC4Q92889 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
ERCC4Q92889 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
ERCC4Q92889 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.23■□□□□ 0.35
ERCC4Q92889 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ERCC4Q92889 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ERCC4Q92889 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC4Q92889 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ERCC4Q92889 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms