Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 DERL2-202ENST00000570848 657 ntTSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 CLUHP6-201ENST00000580789 941 ntBASIC14.37□□□□□ -0.11
TM9SF4Q92544 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 LARP4-220ENST00000615080 856 ntTSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 MIR6869-201ENST00000619434 62 ntBASIC14.37□□□□□ -0.11
TM9SF4Q92544 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TM9SF4Q92544 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.37□□□□□ -0.11
TM9SF4Q92544 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 KRT8P44-201ENST00000441609 1350 ntBASIC14.36□□□□□ -0.11
TM9SF4Q92544 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC007191.1-201ENST00000623179 2995 ntBASIC14.36□□□□□ -0.11
TM9SF4Q92544 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AL133267.1-201ENST00000398220 340 ntBASIC14.36□□□□□ -0.11
TM9SF4Q92544 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC093433.1-201ENST00000458048 571 ntBASIC14.36□□□□□ -0.11
TM9SF4Q92544 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 MIR4538-201ENST00000581377 78 ntBASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 LINC00552-201ENST00000625151 2579 ntBASIC14.36□□□□□ -0.11
TM9SF4Q92544 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.36□□□□□ -0.11
TM9SF4Q92544 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TM9SF4Q92544 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TM9SF4Q92544 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TM9SF4Q92544 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms