Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 FAM45BP-202ENST00000592932 1624 ntBASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAF3IP1Q8TDR0 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 MRPS18AP1-201ENST00000414458 589 ntBASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 RN7SL399P-201ENST00000471648 279 ntBASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AC015656.1-201ENST00000624209 3578 ntBASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 AL390755.1-201ENST00000623716 2027 ntBASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 CICP14-201ENST00000629111 2732 ntBASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAF3IP1Q8TDR0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 CYMP-203ENST00000474680 1263 ntBASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC104596.2-201ENST00000512793 793 ntBASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC107373.2-201ENST00000607735 490 ntBASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 LILRP1-201ENST00000444199 1370 ntBASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 DRD5P1-201ENST00000456605 1438 ntBASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms