Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 AC087499.5-201ENST00000452760 1342 ntBASIC22.67■■□□□ 1.22
CCER1Q8TC90 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 TEX48-202ENST00000612244 662 ntTSL 3 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 AC004461.2-201ENST00000629517 803 ntBASIC22.67■■□□□ 1.22
CCER1Q8TC90 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC22.67■■□□□ 1.22
CCER1Q8TC90 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCER1Q8TC90 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 BAD-202ENST00000394531 631 ntTSL 3 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 AC092580.3-201ENST00000430932 139 ntBASIC22.66■■□□□ 1.22
CCER1Q8TC90 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 BAD-207ENST00000544785 525 ntTSL 3 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 TKT-201ENST00000296289 1931 ntTSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCER1Q8TC90 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
CCER1Q8TC90 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 BANP-203ENST00000393207 2438 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 TIMM17BP1-201ENST00000545713 516 ntBASIC22.65■■□□□ 1.22
CCER1Q8TC90 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC22.65■■□□□ 1.22
CCER1Q8TC90 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCER1Q8TC90 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms