Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 UBTF-206ENST00000527034 3010 ntTSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 TMEM255A-201ENST00000309720 3394 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 SNX20-201ENST00000300590 3304 ntTSL 2 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
SVIPQ8NHG7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 CPSF3-202ENST00000460593 3157 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 ACSM5P1-201ENST00000566754 2438 ntBASIC9.14□□□□□ -0.95
SVIPQ8NHG7 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 MEOX1-201ENST00000318579 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 SRCAP-202ENST00000395059 9126 ntTSL 2 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AP005264.8-201ENST00000623093 3313 ntBASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC209007.1-201ENST00000401075 1342 ntBASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AIF1L-204ENST00000372300 3284 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 BCAR3-202ENST00000370243 3200 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC020743.1-201ENST00000454877 767 ntTSL 3 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC092611.3-201ENST00000624858 718 ntBASIC9.14□□□□□ -0.95
SVIPQ8NHG7 SAMMSON-214ENST00000641395 1264 ntBASIC9.14□□□□□ -0.95
SVIPQ8NHG7 TTC12-201ENST00000314756 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 FAM46A-202ENST00000369754 5664 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 SEC61A1-203ENST00000464451 1871 ntTSL 2 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 IFIT5-201ENST00000371795 4015 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC020895.2-201ENST00000624996 1839 ntBASIC9.14□□□□□ -0.95
SVIPQ8NHG7 SPRY2-202ENST00000377104 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 TRAK1-206ENST00000449246 3260 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 NEXMIF-201ENST00000055682 11719 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC079612.1-201ENST00000358775 3700 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SVIPQ8NHG7 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 AC106820.4-201ENST00000561847 5616 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 AC073578.3-201ENST00000624926 4191 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 IPO13-202ENST00000372343 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MED8-203ENST00000372457 1924 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 NR1H5P-201ENST00000452683 1377 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 CAMK2G-207ENST00000423381 3824 ntTSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 HTR2C-203ENST00000371951 3288 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ZSWIM5P3-201ENST00000511265 2743 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 CETN4P-206ENST00000642099 2168 ntBASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 RIC8B-201ENST00000355478 3207 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MTHFR-204ENST00000376590 7094 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 LINC01539-201ENST00000587904 2068 ntTSL 2 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 DNAJB7-201ENST00000307221 2578 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 ZNF226-202ENST00000337433 2565 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 EHD2-201ENST00000263277 3585 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SVIPQ8NHG7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 59.5 ms