RNA–Protein interactions for RNA: ENST00000641395.1

SAMMSON-214, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-214ENST00000641395 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
SAMMSON-214ENST00000641395 CHIC1Q5VXU3 224 aa23.15■■□□□ 1.3
SAMMSON-214ENST00000641395 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
SAMMSON-214ENST00000641395 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
SAMMSON-214ENST00000641395 FOXD1Q16676 465 aa19.65■□□□□ 0.74
SAMMSON-214ENST00000641395 MSH5O43196 834 aa18.56■□□□□ 0.56
SAMMSON-214ENST00000641395 POTEDQ86YR6 584 aa18.49■□□□□ 0.55
SAMMSON-214ENST00000641395 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
SAMMSON-214ENST00000641395 PIAS4Q8N2W9 510 aaPredicted RBP18.32■□□□□ 0.52
SAMMSON-214ENST00000641395 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
SAMMSON-214ENST00000641395 ADRA2BP18089 450 aa18.09■□□□□ 0.49
SAMMSON-214ENST00000641395 MAPK8IP2Q13387 824 aaPredicted RBP16.69■□□□□ 0.26
SAMMSON-214ENST00000641395 SCAF1Q9H7N4 1312 aaKnown RBP16.69■□□□□ 0.26
SAMMSON-214ENST00000641395 DMRT2Q9Y5R5 561 aa16.67■□□□□ 0.26
SAMMSON-214ENST00000641395 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.16
SAMMSON-214ENST00000641395 PPP4R3CPQ6ZMV5 832 aa16.08■□□□□ 0.16
SAMMSON-214ENST00000641395 DCAF8L1A6NGE4 600 aa16.03■□□□□ 0.16
SAMMSON-214ENST00000641395 HOXD11P31277 338 aaPredicted RBP15.96■□□□□ 0.15
SAMMSON-214ENST00000641395 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
SAMMSON-214ENST00000641395 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
SAMMSON-214ENST00000641395 RNF39Q9H2S5 420 aa15.77■□□□□ 0.12
SAMMSON-214ENST00000641395 C1QBPQ07021 282 aaKnown RBP15.58■□□□□ 0.08
SAMMSON-214ENST00000641395 DNAJC5BQ9UF47 199 aa15.52■□□□□ 0.08
SAMMSON-214ENST00000641395 NISCHQ9Y2I1 1504 aa15.51■□□□□ 0.07
SAMMSON-214ENST00000641395 NCBP3Q53F19 620 aaKnown RBP15.46■□□□□ 0.07
SAMMSON-214ENST00000641395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.25■□□□□ 0.03
SAMMSON-214ENST00000641395 SLC24A1O60721 1099 aa15.14■□□□□ 0.01
SAMMSON-214ENST00000641395 NPM3O75607 178 aaKnown RBP15.14■□□□□ 0.01
SAMMSON-214ENST00000641395 U3KPZ7 1027 aaPredicted RBP14.83□□□□□ -0.04
SAMMSON-214ENST00000641395 KCNA4P22459 653 aa14.82□□□□□ -0.04
SAMMSON-214ENST00000641395 CAPN15O75808 1086 aa14.73□□□□□ -0.05
SAMMSON-214ENST00000641395 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
SAMMSON-214ENST00000641395 DSG3P32926 999 aa14.68□□□□□ -0.06
SAMMSON-214ENST00000641395 APLP2Q06481 763 aa14.52□□□□□ -0.09
SAMMSON-214ENST00000641395 SLC4A2P04920 1241 aa14.51□□□□□ -0.09
SAMMSON-214ENST00000641395 POTEHQ6S545 545 aa14.46□□□□□ -0.09
SAMMSON-214ENST00000641395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.44□□□□□ -0.1
SAMMSON-214ENST00000641395 HNRNPUL2Q1KMD3 747 aaKnown RBP14.44□□□□□ -0.1
SAMMSON-214ENST00000641395 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
SAMMSON-214ENST00000641395 ZNF219Q9P2Y4 722 aaPredicted RBP14.42□□□□□ -0.1
SAMMSON-214ENST00000641395 SAMD1Q6SPF0 538 aaPredicted RBP14.32□□□□□ -0.12
SAMMSON-214ENST00000641395 ABCB7O75027 752 aa14.31□□□□□ -0.12
SAMMSON-214ENST00000641395 SLC4A1APQ9BWU0 796 aaKnown RBP14.24□□□□□ -0.13
SAMMSON-214ENST00000641395 RBM42Q9BTD8 480 aaKnown RBP14.08□□□□□ -0.16
SAMMSON-214ENST00000641395 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
SAMMSON-214ENST00000641395 EHMT2Q96KQ7 1210 aa13.99□□□□□ -0.17
SAMMSON-214ENST00000641395 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
SAMMSON-214ENST00000641395 POLA2Q14181 598 aa13.98□□□□□ -0.17
SAMMSON-214ENST00000641395 DAXXQ9UER7 740 aaPredicted RBP13.93□□□□□ -0.18
SAMMSON-214ENST00000641395 MYT1Q01538 1121 aa13.89□□□□□ -0.19
SAMMSON-214ENST00000641395 TTBK1Q5TCY1 1321 aaPredicted RBP13.85□□□□□ -0.19
SAMMSON-214ENST00000641395 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
SAMMSON-214ENST00000641395 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
SAMMSON-214ENST00000641395 FOXD4L1Q9NU39 408 aa13.76□□□□□ -0.21
SAMMSON-214ENST00000641395 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
SAMMSON-214ENST00000641395 ZBTB12Q9Y330 459 aaPredicted RBP13.73□□□□□ -0.21
SAMMSON-214ENST00000641395 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
SAMMSON-214ENST00000641395 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
SAMMSON-214ENST00000641395 PELP1Q8IZL8 1130 aaKnown RBP13.6□□□□□ -0.23
SAMMSON-214ENST00000641395 ZBTB22O15209 634 aa13.57□□□□□ -0.24
SAMMSON-214ENST00000641395 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
SAMMSON-214ENST00000641395 OSCARQ8IYS5 282 aa13.5□□□□□ -0.25
SAMMSON-214ENST00000641395 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
SAMMSON-214ENST00000641395 PRKCSHP14314 528 aaPredicted RBP13.41□□□□□ -0.26
SAMMSON-214ENST00000641395 PIP4P2Q8N4L2 257 aa13.41□□□□□ -0.26
SAMMSON-214ENST00000641395 ATXN8OSP0DMR3 200 aa13.4□□□□□ -0.26
SAMMSON-214ENST00000641395 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
SAMMSON-214ENST00000641395 ABCC9O60706 1549 aa13.38□□□□□ -0.27
SAMMSON-214ENST00000641395 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
SAMMSON-214ENST00000641395 RTN4Q9NQC3 1192 aaKnown RBP13.34□□□□□ -0.27
SAMMSON-214ENST00000641395 HAX1O00165 279 aa13.31□□□□□ -0.28
SAMMSON-214ENST00000641395 FXR2P51116 673 aaKnown RBP eCLIP13.31□□□□□ -0.28
SAMMSON-214ENST00000641395 FBLN2P98095 1184 aa13.27□□□□□ -0.29
SAMMSON-214ENST00000641395 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
SAMMSON-214ENST00000641395 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
SAMMSON-214ENST00000641395 SPDYE2Q495Y8 402 aa13.25□□□□□ -0.29
SAMMSON-214ENST00000641395 AMER1Q5JTC6 1135 aaPredicted RBP13.1□□□□□ -0.31
SAMMSON-214ENST00000641395 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
SAMMSON-214ENST00000641395 CLEC11AQ9Y240 323 aa13.08□□□□□ -0.32
SAMMSON-214ENST00000641395 ZNF692Q9BU19 519 aaPredicted RBP13.07□□□□□ -0.32
SAMMSON-214ENST00000641395 ARXQ96QS3 562 aa13.06□□□□□ -0.32
SAMMSON-214ENST00000641395 PRKAR2AP13861 404 aaKnown RBP13.04□□□□□ -0.32
SAMMSON-214ENST00000641395 EVX2Q03828 476 aa13.03□□□□□ -0.32
SAMMSON-214ENST00000641395 MKRN4PQ13434 485 aaPredicted RBP13.03□□□□□ -0.32
SAMMSON-214ENST00000641395 SSUH2Q9Y2M2 353 aa13□□□□□ -0.33
SAMMSON-214ENST00000641395 ZCCHC6Q5VYS8 1495 aaKnown RBP12.97□□□□□ -0.33
SAMMSON-214ENST00000641395 NACADO15069 1562 aa12.91□□□□□ -0.34
SAMMSON-214ENST00000641395 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
SAMMSON-214ENST00000641395 RB1CC1Q8TDY2 1594 aa12.89□□□□□ -0.35
SAMMSON-214ENST00000641395 MYO15BQ96JP2 1530 aa12.88□□□□□ -0.35
SAMMSON-214ENST00000641395 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
SAMMSON-214ENST00000641395 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
SAMMSON-214ENST00000641395 PABPN1Q86U42 306 aaKnown RBP eCLIP12.84□□□□□ -0.35
SAMMSON-214ENST00000641395 CHADLQ6NUI6 762 aa12.8□□□□□ -0.36
SAMMSON-214ENST00000641395 GABBR2O75899 941 aa12.78□□□□□ -0.36
SAMMSON-214ENST00000641395 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
SAMMSON-214ENST00000641395 DCAF8L2P0C7V8 631 aa12.77□□□□□ -0.37
SAMMSON-214ENST00000641395 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
SAMMSON-214ENST00000641395 RANGAP1P46060 587 aaPredicted RBP12.76□□□□□ -0.37
SAMMSON-214ENST00000641395 UNC13AQ9UPW8 1703 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms