Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 Z82170.1-201ENST00000625081 3192 ntBASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC17.56■□□□□ 0.4
PDZRN4Q6ZMN7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC100757.3-201ENST00000622361 1406 ntBASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 MIR661-201ENST00000384842 89 ntBASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC004890.2-204ENST00000481968 304 ntBASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC020765.3-201ENST00000613051 740 ntBASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AL590560.3-201ENST00000623350 461 ntBASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PDZRN4Q6ZMN7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC023024.2-201ENST00000623561 1993 ntBASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 RNA5SP410-201ENST00000516285 106 ntBASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC190387.1-201ENST00000551683 408 ntBASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AL138828.2-201ENST00000615812 383 ntBASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC008761.3-201ENST00000624803 892 ntBASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AC011477.6-201ENST00000604980 1927 ntBASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
PDZRN4Q6ZMN7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms