Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 AL592424.1-201ENST00000563624 1536 ntBASIC13.81□□□□□ -0.2
CACNA1BQ00975 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 AC026884.1-201ENST00000418296 457 ntBASIC13.81□□□□□ -0.2
CACNA1BQ00975 SAP18P2-201ENST00000434334 459 ntBASIC13.81□□□□□ -0.2
CACNA1BQ00975 AC025186.1-201ENST00000478174 870 ntBASIC13.81□□□□□ -0.2
CACNA1BQ00975 AC008026.2-201ENST00000495438 348 ntBASIC13.81□□□□□ -0.2
CACNA1BQ00975 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 AC226150.1-201ENST00000544259 466 ntBASIC13.81□□□□□ -0.2
CACNA1BQ00975 INO80E-209ENST00000567254 625 ntTSL 2 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CACNA1BQ00975 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CACNA1BQ00975 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 HLA-DMA-202ENST00000395303 1007 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 AL645937.2-201ENST00000396808 931 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 TRMT112P3-201ENST00000580149 358 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 AP000593.2-201ENST00000542775 1433 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 AC018695.7-201ENST00000624587 2492 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PIFO-201ENST00000369737 746 ntTSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 KRT18P46-201ENST00000435568 1279 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CACNA1BQ00975 B9D1-206ENST00000461069 923 ntTSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 MST1L-204ENST00000545160 559 ntTSL 4 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 ACTBP9-201ENST00000587663 1099 ntBASIC13.8□□□□□ -0.2
CACNA1BQ00975 AC008764.4-207ENST00000600705 956 ntTSL 2 BASIC13.8□□□□□ -0.2
CACNA1BQ00975 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms