Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX6-1P78426 GOLGA2P4-201ENST00000441462 777 ntBASIC13.45□□□□□ -0.26
NKX6-1P78426 AC007551.1-201ENST00000457394 519 ntBASIC13.45□□□□□ -0.26
NKX6-1P78426 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX6-1P78426 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX6-1P78426 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX6-1P78426 AC068587.3-201ENST00000526613 355 ntBASIC13.45□□□□□ -0.26
NKX6-1P78426 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.45□□□□□ -0.26
NKX6-1P78426 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 AL359711.2-201ENST00000563105 872 ntBASIC13.45□□□□□ -0.26
NKX6-1P78426 MIR3615-201ENST00000581999 87 ntBASIC13.45□□□□□ -0.26
NKX6-1P78426 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.45□□□□□ -0.26
NKX6-1P78426 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.45□□□□□ -0.26
NKX6-1P78426 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NKX6-1P78426 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NKX6-1P78426 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.44□□□□□ -0.26
NKX6-1P78426 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
NKX6-1P78426 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-1P78426 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-1P78426 AC134915.1-201ENST00000426461 574 ntBASIC13.44□□□□□ -0.26
NKX6-1P78426 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.44□□□□□ -0.26
NKX6-1P78426 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-1P78426 AC079316.1-201ENST00000548397 411 ntBASIC13.44□□□□□ -0.26
NKX6-1P78426 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX6-1P78426 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX6-1P78426 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.44□□□□□ -0.26
NKX6-1P78426 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX6-1P78426 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.44□□□□□ -0.26
NKX6-1P78426 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.44□□□□□ -0.26
NKX6-1P78426 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.44□□□□□ -0.26
NKX6-1P78426 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NKX6-1P78426 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX6-1P78426 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.43□□□□□ -0.26
NKX6-1P78426 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NKX6-1P78426 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.43□□□□□ -0.26
NKX6-1P78426 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.43□□□□□ -0.26
NKX6-1P78426 RPL13AP25-201ENST00000484130 612 ntBASIC13.43□□□□□ -0.26
NKX6-1P78426 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 AP001889.1-201ENST00000525414 633 ntBASIC13.43□□□□□ -0.26
NKX6-1P78426 AP000812.2-201ENST00000538934 718 ntBASIC13.43□□□□□ -0.26
NKX6-1P78426 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NKX6-1P78426 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms