Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.54□□□□□ -0.08
VSX2P58304 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
VSX2P58304 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 HLA-K-203ENST00000430151 1046 ntBASIC14.54□□□□□ -0.08
VSX2P58304 AC244107.1-201ENST00000442033 332 ntBASIC14.54□□□□□ -0.08
VSX2P58304 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
VSX2P58304 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.54□□□□□ -0.08
VSX2P58304 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
VSX2P58304 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.54□□□□□ -0.08
VSX2P58304 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 AL359881.2-201ENST00000602973 570 ntBASIC14.54□□□□□ -0.08
VSX2P58304 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
VSX2P58304 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 AL360270.3-201ENST00000609118 1348 ntBASIC14.54□□□□□ -0.08
VSX2P58304 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
VSX2P58304 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
VSX2P58304 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 AL109954.1-202ENST00000564051 2148 ntBASIC14.54□□□□□ -0.08
VSX2P58304 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.54□□□□□ -0.08
VSX2P58304 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 TCAF2P1-201ENST00000291129 2421 ntBASIC14.54□□□□□ -0.08
VSX2P58304 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.54□□□□□ -0.08
VSX2P58304 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VSX2P58304 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VSX2P58304 AL009178.2-201ENST00000597278 2719 ntBASIC14.53□□□□□ -0.08
VSX2P58304 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.53□□□□□ -0.08
VSX2P58304 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
VSX2P58304 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 ANKRD19P-201ENST00000338192 862 ntBASIC14.53□□□□□ -0.08
VSX2P58304 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 AC022616.1-201ENST00000518688 554 ntBASIC14.53□□□□□ -0.08
VSX2P58304 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
VSX2P58304 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.53□□□□□ -0.08
VSX2P58304 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.53□□□□□ -0.08
VSX2P58304 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.53□□□□□ -0.08
VSX2P58304 AC025279.2-201ENST00000569730 653 ntBASIC14.53□□□□□ -0.08
VSX2P58304 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.53□□□□□ -0.08
VSX2P58304 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
VSX2P58304 AP000845.1-201ENST00000581677 2131 ntBASIC14.53□□□□□ -0.08
VSX2P58304 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
VSX2P58304 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
VSX2P58304 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
VSX2P58304 AC022532.1-201ENST00000624563 1728 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms