Protein–RNA interactions for Protein: P49840

GSK3A, Glycogen synthase kinase-3 alpha, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSK3AP49840 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.3□□□□□ -0.28
GSK3AP49840 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
GSK3AP49840 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
GSK3AP49840 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.3□□□□□ -0.28
GSK3AP49840 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
GSK3AP49840 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
GSK3AP49840 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
GSK3AP49840 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.29□□□□□ -0.28
GSK3AP49840 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.29□□□□□ -0.28
GSK3AP49840 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC13.29□□□□□ -0.28
GSK3AP49840 BASP1P1-201ENST00000430708 665 ntBASIC13.29□□□□□ -0.28
GSK3AP49840 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.29□□□□□ -0.28
GSK3AP49840 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.29□□□□□ -0.28
GSK3AP49840 AC093214.1-201ENST00000511688 1107 ntBASIC13.29□□□□□ -0.28
GSK3AP49840 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.29□□□□□ -0.28
GSK3AP49840 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.29□□□□□ -0.28
GSK3AP49840 AL390955.2-201ENST00000603032 514 ntBASIC13.29□□□□□ -0.28
GSK3AP49840 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.29□□□□□ -0.28
GSK3AP49840 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 REXO1L4P-201ENST00000605109 1937 ntBASIC13.29□□□□□ -0.28
GSK3AP49840 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.29□□□□□ -0.28
GSK3AP49840 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GSK3AP49840 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
GSK3AP49840 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GSK3AP49840 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GSK3AP49840 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.28□□□□□ -0.28
GSK3AP49840 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.28□□□□□ -0.28
GSK3AP49840 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.28□□□□□ -0.28
GSK3AP49840 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
GSK3AP49840 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.28□□□□□ -0.28
GSK3AP49840 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.28□□□□□ -0.28
GSK3AP49840 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.28□□□□□ -0.28
GSK3AP49840 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.28□□□□□ -0.28
GSK3AP49840 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 AL034417.3-201ENST00000641100 1043 ntBASIC13.28□□□□□ -0.28
GSK3AP49840 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GSK3AP49840 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms