Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.36□□□□□ -0.11
CLK1P49759 AC092183.1-201ENST00000469884 875 ntBASIC14.36□□□□□ -0.11
CLK1P49759 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 AC073592.8-201ENST00000624126 511 ntBASIC14.36□□□□□ -0.11
CLK1P49759 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CLK1P49759 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CLK1P49759 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CLK1P49759 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CLK1P49759 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 BEND3P1-201ENST00000421591 1944 ntBASIC14.35□□□□□ -0.11
CLK1P49759 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CLK1P49759 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 AC136604.1-201ENST00000418535 575 ntBASIC14.35□□□□□ -0.11
CLK1P49759 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.35□□□□□ -0.11
CLK1P49759 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.35□□□□□ -0.11
CLK1P49759 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.35□□□□□ -0.11
CLK1P49759 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CLK1P49759 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CLK1P49759 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CLK1P49759 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.34□□□□□ -0.11
CLK1P49759 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 RPL37AP1-201ENST00000412502 279 ntBASIC14.34□□□□□ -0.11
CLK1P49759 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
CLK1P49759 AL080243.2-201ENST00000418783 582 ntBASIC14.34□□□□□ -0.11
CLK1P49759 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.34□□□□□ -0.11
CLK1P49759 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.34□□□□□ -0.11
CLK1P49759 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 AL033527.5-202ENST00000641632 1098 ntBASIC14.34□□□□□ -0.11
CLK1P49759 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CLK1P49759 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.34□□□□□ -0.11
CLK1P49759 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.34□□□□□ -0.11
CLK1P49759 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms