Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.05□□□□□ -0.48
CDC34P49427 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.05□□□□□ -0.48
CDC34P49427 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC12.05□□□□□ -0.48
CDC34P49427 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CDC34P49427 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 AC023090.2-201ENST00000625182 2110 ntBASIC12.05□□□□□ -0.48
CDC34P49427 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.05□□□□□ -0.48
CDC34P49427 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
CDC34P49427 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CDC34P49427 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.05□□□□□ -0.48
CDC34P49427 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.04□□□□□ -0.48
CDC34P49427 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.04□□□□□ -0.48
CDC34P49427 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.04□□□□□ -0.48
CDC34P49427 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 KRT18P21-201ENST00000515767 1272 ntBASIC12.04□□□□□ -0.48
CDC34P49427 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC12.04□□□□□ -0.48
CDC34P49427 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC12.04□□□□□ -0.48
CDC34P49427 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 PRR29-207ENST00000580752 458 ntTSL 3 BASIC12.04□□□□□ -0.48
CDC34P49427 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
CDC34P49427 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 IFNL4P1-201ENST00000607083 540 ntBASIC12.04□□□□□ -0.48
CDC34P49427 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
CDC34P49427 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CDC34P49427 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
CDC34P49427 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CDC34P49427 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CDC34P49427 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms