Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 GMPR-203ENST00000543191 675 ntTSL 29.99□□□□□ -0.816e-6■□□□□ 8.7
RPS3P23396 UBAP2L-214ENST00000475373 838 ntTSL 29.36□□□□□ -0.916e-6■□□□□ 8.7
RPS3P23396 SF3B2-210ENST00000530981 1080 ntTSL 58.97□□□□□ -0.976e-6■□□□□ 8.7
RPS3P23396 ADAR-203ENST00000463920 2347 ntTSL 28.45□□□□□ -1.066e-6■□□□□ 8.7
RPS3P23396 GMPR-204ENST00000544145 750 ntTSL 37.22□□□□□ -1.256e-6■□□□□ 8.7
RPS3P23396 BNIP3L-205ENST00000521254 502 ntTSL 26.6□□□□□ -1.356e-6■□□□□ 8.7
RPS3P23396 LINC00534-202ENST00000523283 772 ntTSL 26.35□□□□□ -1.396e-6■□□□□ 8.7
RPS3P23396 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.35□□□□□ -1.396e-6■□□□□ 8.7
RPS3P23396 UBQLN1-206ENST00000533705 6055 ntTSL 1 (best)6.08□□□□□ -1.446e-6■□□□□ 8.7
RPS3P23396 LINC00534-204ENST00000524361 620 ntTSL 35.87□□□□□ -1.476e-6■□□□□ 8.7
RPS3P23396 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.496e-6■□□□□ 8.7
RPS3P23396 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.78□□□□□ -1.646e-6■□□□□ 8.7
RPS3P23396 TRIM27-204ENST00000467742 541 ntTSL 24.77□□□□□ -1.656e-6■□□□□ 8.7
RPS3P23396 POLD2-205ENST00000436400 249 ntTSL 34.08□□□□□ -1.766e-6■□□□□ 8.7
RPS3P23396 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.38□□□□□ -1.876e-6■□□□□ 8.7
RPS3P23396 SEC31A-235ENST00000512732 551 ntTSL 42.51□□□□□ -2.016e-6■□□□□ 8.7
RPS3P23396 UBQLN1-203ENST00000526134 475 ntTSL 32.16□□□□□ -2.066e-6■□□□□ 8.7
RPS3P23396 SEC31A-212ENST00000503226 613 ntTSL 31.85□□□□□ -2.116e-6■□□□□ 8.7
RPS3P23396 ERBB3-208ENST00000549205 971 ntTSL 512.11□□□□□ -0.472e-6■□□□□ 8.7
RPS3P23396 PICALM-211ENST00000529016 757 ntTSL 33.63□□□□□ -1.834e-8■□□□□ 8.7
RPS3P23396 PICALM-207ENST00000526961 802 ntTSL 52.95□□□□□ -1.944e-8■□□□□ 8.7
RPS3P23396 PICALM-214ENST00000530692 963 ntTSL 52.58□□□□□ -24e-8■□□□□ 8.7
RPS3P23396 PICALM-212ENST00000529760 1153 ntTSL 52.2□□□□□ -2.064e-8■□□□□ 8.7
RPS3P23396 PICALM-222ENST00000534375 390 ntTSL 22.05□□□□□ -2.084e-8■□□□□ 8.7
RPS3P23396 PICALM-213ENST00000530542 905 ntTSL 51.67□□□□□ -2.144e-8■□□□□ 8.7
RPS3P23396 PICALM-220ENST00000532603 566 ntTSL 41.03□□□□□ -2.244e-8■□□□□ 8.7
RPS3P23396 CADM1-208ENST00000540373 335 ntTSL 28.37□□□□□ -1.078e-10■□□□□ 8.7
RPS3P23396 PEG3-203ENST00000594389 411 ntTSL 321.08■□□□□ 0.971e-35■□□□□ 8.7
RPS3P23396 PEG3-204ENST00000594706 583 ntTSL 317.92■□□□□ 0.461e-35■□□□□ 8.7
RPS3P23396 PEG3-205ENST00000596261 570 ntTSL 48.08□□□□□ -1.121e-35■□□□□ 8.7
RPS3P23396 EIF5-211ENST00000559532 678 ntTSL 423.59■■□□□ 1.377e-6■□□□□ 8.7
RPS3P23396 EIF5-209ENST00000559130 583 ntTSL 321.02■□□□□ 0.967e-6■□□□□ 8.7
RPS3P23396 EIF5-215ENST00000560763 723 ntTSL 218.38■□□□□ 0.537e-6■□□□□ 8.7
RPS3P23396 EIF5-214ENST00000560338 580 ntTSL 316.18■□□□□ 0.187e-6■□□□□ 8.7
RPS3P23396 EIF5-210ENST00000559249 704 ntTSL 215.95■□□□□ 0.147e-6■□□□□ 8.7
RPS3P23396 EIF2AK1-206ENST00000463213 791 ntTSL 215.74■□□□□ 0.115e-14■□□□□ 8.7
RPS3P23396 CHEK1-209ENST00000527013 661 ntTSL 315.34■□□□□ 0.057e-6■□□□□ 8.7
RPS3P23396 CHEK1-207ENST00000525396 769 ntTSL 215.25■□□□□ 0.037e-6■□□□□ 8.7
RPS3P23396 SF3A3-203ENST00000461869 776 ntTSL 315.13■□□□□ 0.017e-6■□□□□ 8.7
RPS3P23396 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.1■□□□□ 0.017e-6■□□□□ 8.7
RPS3P23396 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.037e-6■□□□□ 8.7
RPS3P23396 IMPDH2-212ENST00000496837 760 ntTSL 214.45□□□□□ -0.17e-6■□□□□ 8.7
RPS3P23396 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.177e-6■□□□□ 8.7
RPS3P23396 EIF5-203ENST00000558265 872 ntTSL 513.29□□□□□ -0.287e-6■□□□□ 8.7
RPS3P23396 EIF5-216ENST00000560877 521 ntTSL 413.27□□□□□ -0.297e-6■□□□□ 8.7
RPS3P23396 SPCS1-204ENST00000474945 981 ntTSL 213.18□□□□□ -0.37e-6■□□□□ 8.7
RPS3P23396 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.377e-6■□□□□ 8.7
RPS3P23396 CLNS1A-201ENST00000263309 1172 ntTSL 3 BASIC12.34□□□□□ -0.437e-6■□□□□ 8.7
RPS3P23396 CLNS1A-207ENST00000527133 667 ntTSL 312.21□□□□□ -0.457e-6■□□□□ 8.7
RPS3P23396 EIF5-204ENST00000558316 719 ntTSL 312.21□□□□□ -0.457e-6■□□□□ 8.7
RPS3P23396 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC11.96□□□□□ -0.497e-6■□□□□ 8.7
RPS3P23396 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC11.86□□□□□ -0.517e-6■□□□□ 8.7
RPS3P23396 CLNS1A-202ENST00000525064 1121 ntTSL 3 BASIC11.33□□□□□ -0.67e-6■□□□□ 8.7
RPS3P23396 CLNS1A-204ENST00000525428 2993 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.657e-6■□□□□ 8.7
RPS3P23396 TXNRD1-223ENST00000531691 728 ntTSL 210.41□□□□□ -0.747e-6■□□□□ 8.7
RPS3P23396 CHEK1-214ENST00000532669 617 ntTSL 510.4□□□□□ -0.747e-6■□□□□ 8.7
RPS3P23396 CHEK1-212ENST00000531607 462 ntTSL 39.93□□□□□ -0.827e-6■□□□□ 8.7
RPS3P23396 SPCS1-203ENST00000448693 826 ntTSL 29.54□□□□□ -0.887e-6■□□□□ 8.7
RPS3P23396 SPCS1-205ENST00000602728 832 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.887e-6■□□□□ 8.7
RPS3P23396 TXNRD1-211ENST00000526266 577 ntTSL 49.43□□□□□ -0.97e-6■□□□□ 8.7
RPS3P23396 TXNRD1-222ENST00000531689 554 ntTSL 48.92□□□□□ -0.987e-6■□□□□ 8.7
RPS3P23396 TXNRD1-218ENST00000528079 629 ntTSL 48.57□□□□□ -1.047e-6■□□□□ 8.7
RPS3P23396 CHEK1-217ENST00000534685 583 ntTSL 58.37□□□□□ -1.077e-6■□□□□ 8.7
RPS3P23396 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC7.84□□□□□ -1.157e-6■□□□□ 8.7
RPS3P23396 TXNRD1-210ENST00000526207 551 ntTSL 1 (best)6.63□□□□□ -1.357e-6■□□□□ 8.7
RPS3P23396 SF3A3-205ENST00000470585 704 ntTSL 36.39□□□□□ -1.397e-6■□□□□ 8.7
RPS3P23396 SF3A3-208ENST00000489537 891 ntTSL 46.35□□□□□ -1.397e-6■□□□□ 8.7
RPS3P23396 CHEK1-208ENST00000526937 562 ntTSL 45.48□□□□□ -1.537e-6■□□□□ 8.7
RPS3P23396 EIF5-206ENST00000558551 744 ntTSL 25.45□□□□□ -1.547e-6■□□□□ 8.7
RPS3P23396 SF3A3-207ENST00000488934 273 ntTSL 54.95□□□□□ -1.627e-6■□□□□ 8.7
RPS3P23396 EIF5-218ENST00000561325 569 ntTSL 42.76□□□□□ -1.977e-6■□□□□ 8.7
RPS3P23396 EIF5-213ENST00000560200 776 ntTSL 52.56□□□□□ -27e-6■□□□□ 8.7
RPS3P23396 YWHAB-205ENST00000477896 410 ntTSL 21.64□□□□□ -2.157e-6■□□□□ 8.7
RPS3P23396 PRELID1-207ENST00000510797 712 ntTSL 323.68■■□□□ 1.381e-22■□□□□ 8.6
RPS3P23396 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.251e-22■□□□□ 8.6
RPS3P23396 PRELID1-202ENST00000502670 587 ntTSL 322.14■■□□□ 1.131e-22■□□□□ 8.6
RPS3P23396 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.14■■□□□ 1.131e-22■□□□□ 8.6
RPS3P23396 PRELID1-208ENST00000511309 778 ntTSL 221.73■■□□□ 1.071e-22■□□□□ 8.6
RPS3P23396 PRELID1-205ENST00000504594 886 ntTSL 317.19■□□□□ 0.341e-22■□□□□ 8.6
RPS3P23396 ERBB3-204ENST00000546748 574 ntTSL 27.74□□□□□ -1.173e-6■□□□□ 8.6
RPS3P23396 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.17□□□□□ -1.747e-8■□□□□ 8.6
RPS3P23396 NFE2L1-216ENST00000583060 477 ntTSL 318.35■□□□□ 0.535e-24■□□□□ 8.6
RPS3P23396 NFE2L1-223ENST00000585299 537 ntTSL 416.33■□□□□ 0.25e-24■□□□□ 8.6
RPS3P23396 NFE2L1-207ENST00000579481 564 ntTSL 215.85■□□□□ 0.135e-24■□□□□ 8.6
RPS3P23396 NFE2L1-215ENST00000582574 556 ntTSL 315.63■□□□□ 0.095e-24■□□□□ 8.6
RPS3P23396 NFE2L1-213ENST00000581441 552 ntTSL 412.85□□□□□ -0.355e-24■□□□□ 8.6
RPS3P23396 PCSK6-204ENST00000558154 852 ntTSL 212.48□□□□□ -0.411e-8■□□□□ 8.6
RPS3P23396 PCSK6-219ENST00000621185 462 ntTSL 212.06□□□□□ -0.481e-8■□□□□ 8.6
RPS3P23396 FGL1-207ENST00000518769 318 ntTSL 32.51□□□□□ -2.011e-8■□□□□ 8.6
RPS3P23396 HNRNPM-209ENST00000597813 630 ntTSL 219.2■□□□□ 0.661e-12■□□□□ 8.6
RPS3P23396 HNRNPM-206ENST00000596984 664 ntTSL 518.01■□□□□ 0.471e-12■□□□□ 8.6
RPS3P23396 CPNE1-226ENST00000486021 506 ntTSL 27.23□□□□□ -1.258e-12■□□□□ 8.6
RPS3P23396 ILF3-220ENST00000590869 531 ntTSL 512.04□□□□□ -0.483e-7■□□□□ 8.6
RPS3P23396 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.688e-8■□□□□ 8.6
RPS3P23396 EIF4A2-206ENST00000441007 480 ntTSL 312.97□□□□□ -0.338e-8■□□□□ 8.6
RPS3P23396 EIF4A2-208ENST00000445596 600 ntTSL 211.77□□□□□ -0.538e-8■□□□□ 8.6
RPS3P23396 YARS-202ENST00000466052 728 ntTSL 310.43□□□□□ -0.748e-8■□□□□ 8.6
RPS3P23396 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.88e-8■□□□□ 8.6
RPS3P23396 UBAC1-206ENST00000489050 864 ntTSL 38.66□□□□□ -1.028e-8■□□□□ 8.6
RPS3P23396 EIF4A2-203ENST00000426808 1751 ntTSL 1 (best)7.01□□□□□ -1.298e-8■□□□□ 8.6
Retrieved 100 of 24,271 protein–RNA pairs in 80.5 ms