RNA–Protein interactions for RNA: ENST00000503226.5

SEC31A-212, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 3

Gene SEC31A, Length 613 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-212ENST00000503226 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
SEC31A-212ENST00000503226 CHIC1Q5VXU3 224 aa21.02■□□□□ 0.96
SEC31A-212ENST00000503226 PHF23Q9BUL5 403 aaPredicted RBP18.52■□□□□ 0.56
SEC31A-212ENST00000503226 SENP3Q9H4L4 574 aaPredicted RBP18.38■□□□□ 0.53
SEC31A-212ENST00000503226 FOXD1Q16676 465 aa17.13■□□□□ 0.33
SEC31A-212ENST00000503226 PLPPR3Q6T4P5 718 aa17.01■□□□□ 0.31
SEC31A-212ENST00000503226 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
SEC31A-212ENST00000503226 ADRA2BP18089 450 aa16.3■□□□□ 0.2
SEC31A-212ENST00000503226 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
SEC31A-212ENST00000503226 MSH5O43196 834 aa15.8■□□□□ 0.12
SEC31A-212ENST00000503226 KCNA4P22459 653 aa15.4■□□□□ 0.06
SEC31A-212ENST00000503226 EHMT2Q96KQ7 1210 aa15.12■□□□□ 0.01
SEC31A-212ENST00000503226 PPP4R3CPQ6ZMV5 832 aa15.07■□□□□ 0
SEC31A-212ENST00000503226 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
SEC31A-212ENST00000503226 MAPK8IP2Q13387 824 aaPredicted RBP14.86□□□□□ -0.03
SEC31A-212ENST00000503226 SCAF1Q9H7N4 1312 aaKnown RBP14.84□□□□□ -0.03
SEC31A-212ENST00000503226 SLC4A1APQ9BWU0 796 aaKnown RBP14.8□□□□□ -0.04
SEC31A-212ENST00000503226 POTEDQ86YR6 584 aa14.72□□□□□ -0.05
SEC31A-212ENST00000503226 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
SEC31A-212ENST00000503226 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
SEC31A-212ENST00000503226 CSRNP3Q8WYN3 585 aa14.58□□□□□ -0.08
SEC31A-212ENST00000503226 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
SEC31A-212ENST00000503226 HOXD11P31277 338 aaPredicted RBP14.34□□□□□ -0.11
SEC31A-212ENST00000503226 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
SEC31A-212ENST00000503226 ZBTB22O15209 634 aa14.14□□□□□ -0.15
SEC31A-212ENST00000503226 DNAJC5BQ9UF47 199 aa14.03□□□□□ -0.16
SEC31A-212ENST00000503226 FOXD4L1Q9NU39 408 aa14□□□□□ -0.17
SEC31A-212ENST00000503226 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
SEC31A-212ENST00000503226 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
SEC31A-212ENST00000503226 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
SEC31A-212ENST00000503226 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.243e-8■□□□□ 10.8
SEC31A-212ENST00000503226 MYCNP04198 464 aaPredicted RBP13.51□□□□□ -0.25
SEC31A-212ENST00000503226 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
SEC31A-212ENST00000503226 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
SEC31A-212ENST00000503226 C1QBPQ07021 282 aaKnown RBP13.37□□□□□ -0.27
SEC31A-212ENST00000503226 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
SEC31A-212ENST00000503226 FKBP8Q14318 412 aa13.2□□□□□ -0.3
SEC31A-212ENST00000503226 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.13□□□□□ -0.31
SEC31A-212ENST00000503226 HNRNPUL2Q1KMD3 747 aaKnown RBP13.13□□□□□ -0.31
SEC31A-212ENST00000503226 SAMD1Q6SPF0 538 aaPredicted RBP13.09□□□□□ -0.31
SEC31A-212ENST00000503226 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
SEC31A-212ENST00000503226 AMER1Q5JTC6 1135 aaPredicted RBP13.07□□□□□ -0.32
SEC31A-212ENST00000503226 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
SEC31A-212ENST00000503226 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
SEC31A-212ENST00000503226 APLP2Q06481 763 aa12.96□□□□□ -0.33
SEC31A-212ENST00000503226 CAPN15O75808 1086 aa12.93□□□□□ -0.34
SEC31A-212ENST00000503226 DSG3P32926 999 aa12.86□□□□□ -0.35
SEC31A-212ENST00000503226 ZNF219Q9P2Y4 722 aaPredicted RBP12.85□□□□□ -0.35
SEC31A-212ENST00000503226 TRHP20396 242 aaPredicted RBP12.83□□□□□ -0.36
SEC31A-212ENST00000503226 SLC24A1O60721 1099 aa12.79□□□□□ -0.36
SEC31A-212ENST00000503226 ABCB7O75027 752 aa12.68□□□□□ -0.38
SEC31A-212ENST00000503226 POLA2Q14181 598 aa12.63□□□□□ -0.39
SEC31A-212ENST00000503226 SPDYE4A6NLX3 237 aa12.6□□□□□ -0.39
SEC31A-212ENST00000503226 FBLN2P98095 1184 aa12.56□□□□□ -0.4
SEC31A-212ENST00000503226 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
SEC31A-212ENST00000503226 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
SEC31A-212ENST00000503226 ZBTB12Q9Y330 459 aaPredicted RBP12.39□□□□□ -0.43
SEC31A-212ENST00000503226 PROM2Q8N271 834 aa12.37□□□□□ -0.43
SEC31A-212ENST00000503226 VASPP50552 380 aaPredicted RBP12.34□□□□□ -0.43
SEC31A-212ENST00000503226 IFNLR1Q8IU57 520 aaPredicted RBP12.21□□□□□ -0.45
SEC31A-212ENST00000503226 OSCARQ8IYS5 282 aa12.21□□□□□ -0.45
SEC31A-212ENST00000503226 DCAF8L2P0C7V8 631 aa12.17□□□□□ -0.46
SEC31A-212ENST00000503226 RBM42Q9BTD8 480 aaKnown RBP12.17□□□□□ -0.46
SEC31A-212ENST00000503226 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
SEC31A-212ENST00000503226 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
SEC31A-212ENST00000503226 SPDYE2BA6NHP3 402 aa12.07□□□□□ -0.48
SEC31A-212ENST00000503226 SPDYE6P0CI01 402 aa12.07□□□□□ -0.48
SEC31A-212ENST00000503226 SPDYE2Q495Y8 402 aa12.07□□□□□ -0.48
SEC31A-212ENST00000503226 PLCB2Q00722 1185 aa12.05□□□□□ -0.48
SEC31A-212ENST00000503226 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
SEC31A-212ENST00000503226 PKD2Q13563 968 aa12.02□□□□□ -0.49
SEC31A-212ENST00000503226 SSUH2Q9Y2M2 353 aa12.02□□□□□ -0.49
SEC31A-212ENST00000503226 STAG3Q9UJ98 1225 aa12.01□□□□□ -0.49
SEC31A-212ENST00000503226 SPOCK2Q92563 424 aa12□□□□□ -0.49
SEC31A-212ENST00000503226 PLCD3Q8N3E9 789 aa11.98□□□□□ -0.49
SEC31A-212ENST00000503226 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
SEC31A-212ENST00000503226 HAP1P54257 671 aaPredicted RBP11.96□□□□□ -0.49
SEC31A-212ENST00000503226 REM2Q8IYK8 340 aaPredicted RBP11.93□□□□□ -0.5
SEC31A-212ENST00000503226 ECM2O94769 699 aaPredicted RBP11.92□□□□□ -0.5
SEC31A-212ENST00000503226 MIER1Q8N108 512 aa11.92□□□□□ -0.5
SEC31A-212ENST00000503226 PLEKHG5O94827 1062 aa11.83□□□□□ -0.52
SEC31A-212ENST00000503226 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.81□□□□□ -0.52
SEC31A-212ENST00000503226 PITPNM1O00562 1244 aa11.79□□□□□ -0.52
SEC31A-212ENST00000503226 CHRDL2Q6WN34 429 aa11.77□□□□□ -0.53
SEC31A-212ENST00000503226 BBXQ8WY36 941 aaPredicted RBP11.77□□□□□ -0.53
SEC31A-212ENST00000503226 ZBTB47Q9UFB7 747 aaPredicted RBP11.77□□□□□ -0.53
SEC31A-212ENST00000503226 CIZ1Q9ULV3 898 aaPredicted RBP11.77□□□□□ -0.53
SEC31A-212ENST00000503226 RGL2O15211 777 aa11.74□□□□□ -0.53
SEC31A-212ENST00000503226 SPDYE1Q8NFV5 336 aaPredicted RBP11.73□□□□□ -0.53
SEC31A-212ENST00000503226 CFAP44Q96MT7 982 aa11.72□□□□□ -0.53
SEC31A-212ENST00000503226 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC31A-212ENST00000503226 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
SEC31A-212ENST00000503226 VSIG10Q8N0Z9 540 aa11.7□□□□□ -0.54
SEC31A-212ENST00000503226 BCANQ96GW7 911 aa11.65□□□□□ -0.54
SEC31A-212ENST00000503226 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.551e-8■□□□□ 10
SEC31A-212ENST00000503226 CLEC11AQ9Y240 323 aa11.63□□□□□ -0.55
SEC31A-212ENST00000503226 CHGAP10645 457 aaKnown RBP11.62□□□□□ -0.55
SEC31A-212ENST00000503226 PIP4P2Q8N4L2 257 aa11.61□□□□□ -0.55
SEC31A-212ENST00000503226 SPRYD3Q8NCJ5 442 aa11.61□□□□□ -0.55
SEC31A-212ENST00000503226 POTEHQ6S545 545 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms