RNA–Protein interactions for RNA: ENST00000526134.1

UBQLN1-203, Transcript of ubiquilin 1, humanhuman

TSL 3

Gene UBQLN1, Length 475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-203ENST00000526134 AEBP2Q6ZN18 517 aaPredicted RBP25.66■■□□□ 1.7
UBQLN1-203ENST00000526134 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
UBQLN1-203ENST00000526134 PHF23Q9BUL5 403 aaPredicted RBP22.1■■□□□ 1.13
UBQLN1-203ENST00000526134 SENP3Q9H4L4 574 aaPredicted RBP21.78■■□□□ 1.08
UBQLN1-203ENST00000526134 PLPPR3Q6T4P5 718 aa20.4■□□□□ 0.86
UBQLN1-203ENST00000526134 FOXD1Q16676 465 aa20.19■□□□□ 0.82
UBQLN1-203ENST00000526134 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
UBQLN1-203ENST00000526134 ADRA2BP18089 450 aa19.4■□□□□ 0.7
UBQLN1-203ENST00000526134 PIAS4Q8N2W9 510 aaPredicted RBP18.99■□□□□ 0.63
UBQLN1-203ENST00000526134 MSH5O43196 834 aa18.62■□□□□ 0.57
UBQLN1-203ENST00000526134 PPP4R3CPQ6ZMV5 832 aa17.96■□□□□ 0.47
UBQLN1-203ENST00000526134 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
UBQLN1-203ENST00000526134 MAPK8IP2Q13387 824 aaPredicted RBP17.59■□□□□ 0.41
UBQLN1-203ENST00000526134 KCNA4P22459 653 aa17.55■□□□□ 0.4
UBQLN1-203ENST00000526134 NCBP3Q53F19 620 aaKnown RBP17.5■□□□□ 0.39
UBQLN1-203ENST00000526134 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
UBQLN1-203ENST00000526134 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
UBQLN1-203ENST00000526134 NPM3O75607 178 aaKnown RBP17.25■□□□□ 0.35
UBQLN1-203ENST00000526134 RNF216Q9NWF9 866 aaPredicted RBP17.15■□□□□ 0.34
UBQLN1-203ENST00000526134 HOXD11P31277 338 aaPredicted RBP17.09■□□□□ 0.33
UBQLN1-203ENST00000526134 DNAJC5BQ9UF47 199 aa16.94■□□□□ 0.3
UBQLN1-203ENST00000526134 POTEDQ86YR6 584 aa16.87■□□□□ 0.29
UBQLN1-203ENST00000526134 SLC4A1APQ9BWU0 796 aaKnown RBP16.71■□□□□ 0.27
UBQLN1-203ENST00000526134 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
UBQLN1-203ENST00000526134 SLC4A2P04920 1241 aa16.3■□□□□ 0.2
UBQLN1-203ENST00000526134 ZBTB22O15209 634 aa16.17■□□□□ 0.18
UBQLN1-203ENST00000526134 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
UBQLN1-203ENST00000526134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.186e-12■□□□□ 10.5
UBQLN1-203ENST00000526134 FOXD4L1Q9NU39 408 aa16.17■□□□□ 0.18
UBQLN1-203ENST00000526134 CSRNP3Q8WYN3 585 aa16.13■□□□□ 0.17
UBQLN1-203ENST00000526134 RNF39Q9H2S5 420 aa15.97■□□□□ 0.15
UBQLN1-203ENST00000526134 U3KPZ7 1027 aaPredicted RBP15.97■□□□□ 0.15
UBQLN1-203ENST00000526134 MYCNP04198 464 aaPredicted RBP15.93■□□□□ 0.14
UBQLN1-203ENST00000526134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.8■□□□□ 0.12
UBQLN1-203ENST00000526134 C1QBPQ07021 282 aaKnown RBP15.8■□□□□ 0.12
UBQLN1-203ENST00000526134 HNRNPUL2Q1KMD3 747 aaKnown RBP15.8■□□□□ 0.12
UBQLN1-203ENST00000526134 SAMD1Q6SPF0 538 aaPredicted RBP15.73■□□□□ 0.11
UBQLN1-203ENST00000526134 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
UBQLN1-203ENST00000526134 APLP2Q06481 763 aa15.61■□□□□ 0.09
UBQLN1-203ENST00000526134 ATF5Q9Y2D1 282 aaPredicted RBP15.49■□□□□ 0.07
UBQLN1-203ENST00000526134 SPINK5Q9NQ38 1064 aaPredicted RBP15.47■□□□□ 0.07
UBQLN1-203ENST00000526134 CACNB1Q02641 598 aaPredicted RBP15.44■□□□□ 0.06
UBQLN1-203ENST00000526134 ZNF219Q9P2Y4 722 aaPredicted RBP15.37■□□□□ 0.05
UBQLN1-203ENST00000526134 CAPN15O75808 1086 aa15.36■□□□□ 0.05
UBQLN1-203ENST00000526134 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
UBQLN1-203ENST00000526134 DSG3P32926 999 aa15.2■□□□□ 0.02
UBQLN1-203ENST00000526134 POLA2Q14181 598 aa15.12■□□□□ 0.01
UBQLN1-203ENST00000526134 ABCB7O75027 752 aa15.05■□□□□ -0
UBQLN1-203ENST00000526134 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
UBQLN1-203ENST00000526134 MKRN4PQ13434 485 aaPredicted RBP14.84□□□□□ -0.03
UBQLN1-203ENST00000526134 FBLN2P98095 1184 aa14.81□□□□□ -0.04
UBQLN1-203ENST00000526134 OSCARQ8IYS5 282 aa14.56□□□□□ -0.08
UBQLN1-203ENST00000526134 SPDYE2BA6NHP3 402 aa14.52□□□□□ -0.09
UBQLN1-203ENST00000526134 SPDYE6P0CI01 402 aa14.52□□□□□ -0.09
UBQLN1-203ENST00000526134 SPDYE2Q495Y8 402 aa14.52□□□□□ -0.09
UBQLN1-203ENST00000526134 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
UBQLN1-203ENST00000526134 FKBP8Q14318 412 aa14.49□□□□□ -0.09
UBQLN1-203ENST00000526134 RBM42Q9BTD8 480 aaKnown RBP14.46□□□□□ -0.09
UBQLN1-203ENST00000526134 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
UBQLN1-203ENST00000526134 ZNF692Q9BU19 519 aaPredicted RBP14.41□□□□□ -0.1
UBQLN1-203ENST00000526134 PROM2Q8N271 834 aa14.38□□□□□ -0.11
UBQLN1-203ENST00000526134 AKT1S1Q96B36 256 aa14.33□□□□□ -0.12
UBQLN1-203ENST00000526134 PABPN1Q86U42 306 aaKnown RBP eCLIP14.21□□□□□ -0.13
UBQLN1-203ENST00000526134 REM2Q8IYK8 340 aaPredicted RBP14.16□□□□□ -0.14
UBQLN1-203ENST00000526134 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
UBQLN1-203ENST00000526134 STAG3Q9UJ98 1225 aa14.05□□□□□ -0.16
UBQLN1-203ENST00000526134 FBXO3Q9UK99 471 aa14.05□□□□□ -0.16
UBQLN1-203ENST00000526134 PITPNM1O00562 1244 aa13.97□□□□□ -0.17
UBQLN1-203ENST00000526134 CLEC11AQ9Y240 323 aa13.9□□□□□ -0.18
UBQLN1-203ENST00000526134 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
UBQLN1-203ENST00000526134 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
UBQLN1-203ENST00000526134 VASPP50552 380 aaPredicted RBP13.82□□□□□ -0.2
UBQLN1-203ENST00000526134 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
UBQLN1-203ENST00000526134 MIER1Q8N108 512 aa13.71□□□□□ -0.21
UBQLN1-203ENST00000526134 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
UBQLN1-203ENST00000526134 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
UBQLN1-203ENST00000526134 PLCD3Q8N3E9 789 aa13.67□□□□□ -0.22
UBQLN1-203ENST00000526134 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
UBQLN1-203ENST00000526134 PLEKHG5O94827 1062 aa13.64□□□□□ -0.23
UBQLN1-203ENST00000526134 MNX1P50219 401 aaPredicted RBP13.62□□□□□ -0.23
UBQLN1-203ENST00000526134 PRKAR2AP13861 404 aaKnown RBP13.6□□□□□ -0.23
UBQLN1-203ENST00000526134 ZBTB47Q9UFB7 747 aaPredicted RBP13.6□□□□□ -0.23
UBQLN1-203ENST00000526134 CHADLQ6NUI6 762 aa13.57□□□□□ -0.24
UBQLN1-203ENST00000526134 FARP1Q9Y4F1 1045 aaPredicted RBP13.52□□□□□ -0.25
UBQLN1-203ENST00000526134 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
UBQLN1-203ENST00000526134 NPM1P06748 294 aaKnown RBP eCLIP13.47□□□□□ -0.25
UBQLN1-203ENST00000526134 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
UBQLN1-203ENST00000526134 NUBP1P53384 320 aa13.44□□□□□ -0.26
UBQLN1-203ENST00000526134 POTEHQ6S545 545 aa13.36□□□□□ -0.27
UBQLN1-203ENST00000526134 AMER1Q5JTC6 1135 aaPredicted RBP13.32□□□□□ -0.28
UBQLN1-203ENST00000526134 RASEFQ8IZ41 740 aa13.32□□□□□ -0.28
UBQLN1-203ENST00000526134 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
UBQLN1-203ENST00000526134 GSE1Q14687 1217 aa13.27□□□□□ -0.29
UBQLN1-203ENST00000526134 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
UBQLN1-203ENST00000526134 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
UBQLN1-203ENST00000526134 PKD2Q13563 968 aa13.22□□□□□ -0.29
UBQLN1-203ENST00000526134 DCAF8Q5TAQ9 597 aa13.22□□□□□ -0.29
UBQLN1-203ENST00000526134 CD44P16070 742 aaKnown RBP13.21□□□□□ -0.29
UBQLN1-203ENST00000526134 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
UBQLN1-203ENST00000526134 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms