RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
UBQLN1-206ENST00000533705 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
UBQLN1-206ENST00000533705 NISCHQ9Y2I1 1504 aa10.53□□□□□ -0.72
UBQLN1-206ENST00000533705 SHROOM4Q9ULL8 1493 aa10.4□□□□□ -0.75
UBQLN1-206ENST00000533705 EHMT2Q96KQ7 1210 aa10.36□□□□□ -0.75
UBQLN1-206ENST00000533705 APLP2Q06481 763 aa10.14□□□□□ -0.79
UBQLN1-206ENST00000533705 FAM9AQ8IZU1 332 aaPredicted RBP10.13□□□□□ -0.79
UBQLN1-206ENST00000533705 RANGAP1P46060 587 aaPredicted RBP9.96□□□□□ -0.81
UBQLN1-206ENST00000533705 TTBK1Q5TCY1 1321 aaPredicted RBP9.96□□□□□ -0.81
UBQLN1-206ENST00000533705 PELP1Q8IZL8 1130 aaKnown RBP9.92□□□□□ -0.82
UBQLN1-206ENST00000533705 ATP1B4Q9UN42 357 aaPredicted RBP9.91□□□□□ -0.82
UBQLN1-206ENST00000533705 TRIM41Q8WV44 630 aa9.79□□□□□ -0.84
UBQLN1-206ENST00000533705 UBTFP17480 764 aaKnown RBP9.75□□□□□ -0.85
UBQLN1-206ENST00000533705 PCGF6Q9BYE7 350 aa9.74□□□□□ -0.85
UBQLN1-206ENST00000533705 MYT1LQ9UL68 1186 aa9.64□□□□□ -0.87
UBQLN1-206ENST00000533705 CCER1Q8TC90 406 aaPredicted RBP9.63□□□□□ -0.87
UBQLN1-206ENST00000533705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.6□□□□□ -0.87
UBQLN1-206ENST00000533705 HNRNPUL2Q1KMD3 747 aaKnown RBP9.6□□□□□ -0.87
UBQLN1-206ENST00000533705 ZEB1P37275 1124 aaPredicted RBP9.57□□□□□ -0.88
UBQLN1-206ENST00000533705 CENPBP07199 599 aaPredicted RBP9.53□□□□□ -0.88
UBQLN1-206ENST00000533705 PPARGC1BQ86YN6 1023 aaKnown RBP9.5□□□□□ -0.89
UBQLN1-206ENST00000533705 ERICH6Q7L0X2 663 aa9.48□□□□□ -0.89
UBQLN1-206ENST00000533705 CHIC1Q5VXU3 224 aa9.46□□□□□ -0.89
UBQLN1-206ENST00000533705 ITGAEP38570 1179 aa9.46□□□□□ -0.9
UBQLN1-206ENST00000533705 NEFLP07196 543 aa9.43□□□□□ -0.9
UBQLN1-206ENST00000533705 POLR3GLQ9BT43 218 aa9.42□□□□□ -0.9
UBQLN1-206ENST00000533705 PABPN1Q86U42 306 aaKnown RBP eCLIP9.38□□□□□ -0.91
UBQLN1-206ENST00000533705 YTHDC1Q96MU7 727 aaKnown RBP9.37□□□□□ -0.91
UBQLN1-206ENST00000533705 SLC4A1APQ9BWU0 796 aaKnown RBP9.32□□□□□ -0.92
UBQLN1-206ENST00000533705 CNGB1Q14028 1251 aaPredicted RBP9.32□□□□□ -0.92
UBQLN1-206ENST00000533705 ABCC9O60706 1549 aa9.32□□□□□ -0.92
UBQLN1-206ENST00000533705 TRIM26Q12899 539 aaPredicted RBP9.3□□□□□ -0.92
UBQLN1-206ENST00000533705 FBLN2P98095 1184 aa9.27□□□□□ -0.93
UBQLN1-206ENST00000533705 LOC105371045A0A1W2PR82 267 aa9.24□□□□□ -0.93
UBQLN1-206ENST00000533705 FAM50AQ14320 339 aaKnown RBP9.2□□□□□ -0.94
UBQLN1-206ENST00000533705 TRIM52Q96A61 297 aa9.18□□□□□ -0.94
UBQLN1-206ENST00000533705 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
UBQLN1-206ENST00000533705 HRCP23327 699 aa9.12□□□□□ -0.95
UBQLN1-206ENST00000533705 BCANQ96GW7 911 aa9.11□□□□□ -0.95
UBQLN1-206ENST00000533705 ARID3CA6NKF2 412 aa9.08□□□□□ -0.96
UBQLN1-206ENST00000533705 ZNF326Q5BKZ1 582 aaKnown RBP9.08□□□□□ -0.96
UBQLN1-206ENST00000533705 NEUROD1Q13562 356 aa9.07□□□□□ -0.96
UBQLN1-206ENST00000533705 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
UBQLN1-206ENST00000533705 P3H3Q8IVL6 736 aa9.04□□□□□ -0.96
UBQLN1-206ENST00000533705 SLC24A1O60721 1099 aa9.03□□□□□ -0.96
UBQLN1-206ENST00000533705 ESF1Q9H501 851 aaKnown RBP9.01□□□□□ -0.97
UBQLN1-206ENST00000533705 PLPPR3Q6T4P5 718 aa9.01□□□□□ -0.97
UBQLN1-206ENST00000533705 ZNF777Q9ULD5 760 aaPredicted RBP9□□□□□ -0.97
UBQLN1-206ENST00000533705 NPM1P06748 294 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBQLN1-206ENST00000533705 DIEXFQ68CQ4 756 aaKnown RBP8.95□□□□□ -0.98
UBQLN1-206ENST00000533705 CDK11AQ9UQ88 783 aaPredicted RBP8.95□□□□□ -0.98
UBQLN1-206ENST00000533705 ZNF316A6NFI3 1004 aaPredicted RBP8.94□□□□□ -0.98
UBQLN1-206ENST00000533705 ZBTB47Q9UFB7 747 aaPredicted RBP8.94□□□□□ -0.98
UBQLN1-206ENST00000533705 NEFMP07197 916 aa8.93□□□□□ -0.98
UBQLN1-206ENST00000533705 BCL11AQ9H165 835 aa8.93□□□□□ -0.98
UBQLN1-206ENST00000533705 STAG3Q9UJ98 1225 aa8.93□□□□□ -0.98
UBQLN1-206ENST00000533705 CSRNP3Q8WYN3 585 aa8.92□□□□□ -0.98
UBQLN1-206ENST00000533705 CHGAP10645 457 aaKnown RBP8.91□□□□□ -0.98
UBQLN1-206ENST00000533705 ANP32CO43423 234 aa8.91□□□□□ -0.98
UBQLN1-206ENST00000533705 MYT1Q01538 1121 aa8.89□□□□□ -0.99
UBQLN1-206ENST00000533705 CANXP27824 592 aaKnown RBP8.87□□□□□ -0.99
UBQLN1-206ENST00000533705 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
UBQLN1-206ENST00000533705 SCRIBQ14160 1630 aa8.85□□□□□ -0.99
UBQLN1-206ENST00000533705 CHMP7Q8WUX9 453 aaPredicted RBP8.8□□□□□ -1
UBQLN1-206ENST00000533705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.8□□□□□ -18e-9■□□□□ 9.7
UBQLN1-206ENST00000533705 SCAF1Q9H7N4 1312 aaKnown RBP8.77□□□□□ -1.01
UBQLN1-206ENST00000533705 CHIC2Q9UKJ5 165 aa8.75□□□□□ -1.01
UBQLN1-206ENST00000533705 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
UBQLN1-206ENST00000533705 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
UBQLN1-206ENST00000533705 TONSLQ96HA7 1378 aa8.73□□□□□ -1.01
UBQLN1-206ENST00000533705 A0A0G2JS52 829 aa8.73□□□□□ -1.01
UBQLN1-206ENST00000533705 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
UBQLN1-206ENST00000533705 SENP3Q9H4L4 574 aaPredicted RBP8.71□□□□□ -1.01
UBQLN1-206ENST00000533705 PLEKHG5O94827 1062 aa8.71□□□□□ -1.02
UBQLN1-206ENST00000533705 C14orf37Q86TY3 774 aa8.68□□□□□ -1.02
UBQLN1-206ENST00000533705 KDM2AQ9Y2K7 1162 aa8.68□□□□□ -1.02
UBQLN1-206ENST00000533705 ARID4BQ4LE39 1312 aaPredicted RBP8.68□□□□□ -1.02
UBQLN1-206ENST00000533705 ZBTB7CA1YPR0 619 aa8.67□□□□□ -1.02
UBQLN1-206ENST00000533705 PPP1R15AO75807 674 aaPredicted RBP8.67□□□□□ -1.02
UBQLN1-206ENST00000533705 MTUS2Q5JR59 1369 aa8.67□□□□□ -1.02
UBQLN1-206ENST00000533705 GTF3C3Q9Y5Q9 886 aa8.67□□□□□ -1.02
UBQLN1-206ENST00000533705 ZCCHC6Q5VYS8 1495 aaKnown RBP8.66□□□□□ -1.02
UBQLN1-206ENST00000533705 SALL2Q9Y467 1007 aaPredicted RBP8.65□□□□□ -1.02
UBQLN1-206ENST00000533705 NPM2Q86SE8 214 aaKnown RBP8.64□□□□□ -1.03
UBQLN1-206ENST00000533705 PLEKHD1A6NEE1 506 aa8.63□□□□□ -1.03
UBQLN1-206ENST00000533705 HAP1P54257 671 aaPredicted RBP8.62□□□□□ -1.03
UBQLN1-206ENST00000533705 FAM9BQ8IZU0 186 aa8.62□□□□□ -1.03
UBQLN1-206ENST00000533705 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
UBQLN1-206ENST00000533705 DDX10Q13206 875 aaKnown RBP8.61□□□□□ -1.03
UBQLN1-206ENST00000533705 TMC1Q8TDI8 760 aa8.6□□□□□ -1.03
UBQLN1-206ENST00000533705 HNRNPUQ00839 825 aaKnown RBP eCLIP8.6□□□□□ -1.03
UBQLN1-206ENST00000533705 RB1CC1Q8TDY2 1594 aa8.6□□□□□ -1.03
UBQLN1-206ENST00000533705 WDR43Q15061 677 aaKnown RBP eCLIP8.6□□□□□ -1.03
UBQLN1-206ENST00000533705 TRHP20396 242 aaPredicted RBP8.59□□□□□ -1.03
UBQLN1-206ENST00000533705 HSP90AA1P07900 732 aaKnown RBP8.59□□□□□ -1.03
UBQLN1-206ENST00000533705 RRP7BPQ9NSQ0 103 aa8.58□□□□□ -1.04
UBQLN1-206ENST00000533705 UPF2Q9HAU5 1272 aaKnown RBP8.57□□□□□ -1.04
UBQLN1-206ENST00000533705 CLIP1P30622 1438 aa8.56□□□□□ -1.04
UBQLN1-206ENST00000533705 ERCC6Q03468 1493 aa8.56□□□□□ -1.04
UBQLN1-206ENST00000533705 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms