Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
MSR1P21757 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 SOCS2P1-201ENST00000417727 557 ntBASIC13.43□□□□□ -0.26
MSR1P21757 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.43□□□□□ -0.26
MSR1P21757 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 AC092552.1-201ENST00000547243 906 ntBASIC13.43□□□□□ -0.26
MSR1P21757 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.43□□□□□ -0.26
MSR1P21757 SPCS2P1-201ENST00000561636 679 ntBASIC13.43□□□□□ -0.26
MSR1P21757 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 LINC02560-201ENST00000596379 459 ntBASIC13.43□□□□□ -0.26
MSR1P21757 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.43□□□□□ -0.26
MSR1P21757 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 MIR8072-201ENST00000614241 80 ntBASIC13.43□□□□□ -0.26
MSR1P21757 AC008761.3-201ENST00000624803 892 ntBASIC13.43□□□□□ -0.26
MSR1P21757 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.43□□□□□ -0.26
MSR1P21757 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
MSR1P21757 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
MSR1P21757 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
MSR1P21757 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.42□□□□□ -0.26
MSR1P21757 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 AL157414.3-201ENST00000624276 1954 ntBASIC13.42□□□□□ -0.26
MSR1P21757 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.42□□□□□ -0.26
MSR1P21757 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.42□□□□□ -0.26
MSR1P21757 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.42□□□□□ -0.26
MSR1P21757 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.42□□□□□ -0.26
MSR1P21757 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.42□□□□□ -0.26
MSR1P21757 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.42□□□□□ -0.26
MSR1P21757 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.42□□□□□ -0.26
MSR1P21757 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
MSR1P21757 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms